prot_L-elsbetiae_contig2120.6467.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2120.6467.1
Unique Nameprot_L-elsbetiae_contig2120.6467.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length667
Homology
BLAST of mRNA_L-elsbetiae_contig2120.6467.1 vs. uniprot
Match: A0A6H5KJV7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJV7_9PHAE)

HSP 1 Score: 407 bits (1047), Expect = 8.990e-135
Identity = 200/277 (72.20%), Postives = 230/277 (83.03%), Query Frame = 0
Query:  338 RWRRFVGLGDDVCGGDGTVWRPSPVLLDHPQGITPPWLRFRGRYGGTRSIMTEGFWKCRGEAPRRCSAEAKYRSLLEEGLVPDRGVRLGLSRRLLNGNGDRGVWLERRRQTQSRLPLLNMWTRVPGVSSSKPQDEDPPRQAKARTRVHTDLVWLADWGFLRDVRGGTTDAQGWSYHSSQAAYADTGTSGRSKDSGILAHRSRGRVWFRVAATPQVAREVEEARRQDRGRHPRVALALAALDVAGRGDTTVTSASLLQTLRDGVHRRGGTGASPGARE 614
            +WRRFVGLGDD+CGGDG VWRP  V LDHP+G  PPWL+FRGRYGGTR IM+E FW+C GE PRRCSAEAKYRS+LEEGLVPDRGVRLG SRR+L+GNGDRGVWLER RQT++R+P LN WT VPG+SSS+P+D+DPP+         T  VWLA WGFLRD+ GG+TD++GWSYHSSQA YADTG +G  K+ GILAHRSRGRVWFRVAATP+VAREVEEARR+D GRHP  A ALAALDVAG G+T VT+ASLL+TL DGV    G  ++ GARE
Sbjct:   13 KWRRFVGLGDDICGGDGKVWRPHAVQLDHPRGSKPPWLQFRGRYGGTRCIMSEAFWRCGGEPPRRCSAEAKYRSVLEEGLVPDRGVRLGPSRRMLHGNGDRGVWLERHRQTETRVPFLNTWTGVPGLSSSRPRDQDPPKT--------TGRVWLAGWGFLRDLDGGSTDSRGWSYHSSQADYADTGIAGAPKNKGILAHRSRGRVWFRVAATPEVAREVEEARRRDNGRHPPRAFALAALDVAGHGET-VTAASLLRTLGDGVR---GASSNTGARE 277          
BLAST of mRNA_L-elsbetiae_contig2120.6467.1 vs. uniprot
Match: A0A6H5KJP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP6_9PHAE)

HSP 1 Score: 279 bits (713), Expect = 8.510e-86
Identity = 169/240 (70.42%), Postives = 189/240 (78.75%), Query Frame = 0
Query:    1 MDTRDEELKASLLASFCPILRFDAAEKHFPVCAETFISCSVLLRRPKNP---RQAKKEATRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGIQHQQ----QACAKCGQRQGWSIPSRGGWGLVALPSGSESWSASALLEEQQRDR-LHDFRLEPHCCIWNGQPGDLSTVPCYAFAELLDPSAMAPFIGRAGLGPVYELKYVFLYGYNGTTFAVPGTSVGVHTGDLEHVTIRVDAGRRM 232
            MDTR  ELKA LLA F P+++FDA EKH+PV  ETFIS S+LLRRPK P    Q  ++     XXXXXXXXXXXXXXXXXXXXXXXXX      QHQQ    QAC +CGQRQGW  PS+GGW LVALP G++SWS + LLE Q RD+ L++FRLEPH C+W GQ  DLS VPCYAFA+ LDPSA+APFI RAG+GPVYELKY FLYGYNGTTFA+PGTSVGVHTGDLEHVTIRVDA R M
Sbjct:    1 MDTRKGELKAQLLAYFSPVVKFDAGEKHYPVSVETFISSSLLLRRPKTPGGIEQTMEQINLDDXXXXXXXXXXXXXXXXXXXXXXXXXGSAAHDQHQQERMHQACGECGQRQGWRFPSKGGWVLVALPLGAQSWSTATLLEAQLRDKGLNEFRLEPHSCVWGGQERDLSKVPCYAFADPLDPSAVAPFIRRAGVGPVYELKYAFLYGYNGTTFAIPGTSVGVHTGDLEHVTIRVDARRMM 240          
BLAST of mRNA_L-elsbetiae_contig2120.6467.1 vs. uniprot
Match: D7G814_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G814_ECTSI)

HSP 1 Score: 245 bits (625), Expect = 1.770e-74
Identity = 109/147 (74.15%), Postives = 125/147 (85.03%), Query Frame = 0
Query:  335 MPK-----RWRRFVGLGDDVCGGDGTVWRPSPVLLDHPQGITPPWLRFRGRYGGTRSIMTEGFWKCRGEAPRRCSAEAKYRSLLEEGLVPDRGVRLGLSRRLLNGNGDRGVWLERRRQTQSRLPLLNMWTRVPGVSSSKPQDEDPPR 476
            MPK     +WRRFVGLGDD+CGGDG VWRP  V LDHP+G  PPWLRFRGRYGGTR I +E FW+C GE PRRCSAEAKYRS+LEEGLVPDRGVRLG SRR+L+GNGDRGVWLER RQT++R+P LN WT VPG+ SS+P+D+DPP+
Sbjct:    1 MPKPGGGVKWRRFVGLGDDICGGDGKVWRPHAVQLDHPRGSEPPWLRFRGRYGGTRCITSEAFWRCGGEPPRRCSAEAKYRSVLEEGLVPDRGVRLGPSRRMLHGNGDRGVWLERHRQTETRVPFLNTWTGVPGLGSSRPRDQDPPK 147          
BLAST of mRNA_L-elsbetiae_contig2120.6467.1 vs. uniprot
Match: A0A836C7Q3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Q3_9STRA)

HSP 1 Score: 162 bits (409), Expect = 8.070e-38
Identity = 102/296 (34.46%), Postives = 144/296 (48.65%), Query Frame = 0
Query:  164 PCYAFAELLDPSAMAPFIGRAGLGPVYELKYVFLYGYNGTTFAVPGT-------SVGVHTGDLEHVTIRVDAGRRMVLEA---------------FFAAHGTGEGKWVPSREFHRQVEALEAAAHPGFTADVPLSTREFLEVEASTAGEAGGDGDVPEATPAEASGESGVGVRVGGGERLVIYPARNGHASYHMPKRWRRFV------GLGDDVCGGDGTVWRPSPVLLDHPQGITPPWLRFRGRYGGTRSIMTEGFWKCRGEAPRRCSAEAK--YRSLLEEGLVPDRGVRLGLSR 429
            P Y +A+ L P+A+AP + R  LG V +LKY  LY YNG+TF VP          +G H GDLEHV +RVDA    VL                 +++ H TGEGK+V S        AL +                 L+ ++ +A        +P   P     ++GV        R + Y A   HA+Y  P+ WRRF       G GDD+C   G  W P  V++D+P    PPWLRF G+YG + +   + +W+ + E  R+ +      Y S++EEGLVP+R +RLGL+R
Sbjct:  153 PVYGYAKQLPPTAVAPCL-RGALGRVADLKYAMLYTYNGSTFRVPPLPPLRPHGGIGSHLGDLEHVLVRVDADSGRVLXXXXXXXXXXXXXXXXMYYSCHSTGEGKFVASDYLPSVAAALNSRXXXXXXXXXXXXXXXELDPDSDSA-------QLPSTAPRLQFFDNGV--------RPITYAAAGSHANYPEPRSWRRFAIVSWLPGFGDDLCSDRGAEWHPDVVVIDNPVCRYPPWLRFTGQYGHSANFRQQTWWRVQSEHARQIAPTPANYYHSVVEEGLVPNRQLRLGLTR 432          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2120.6467.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5KJV7_9PHAE8.990e-13572.20Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KJP6_9PHAE8.510e-8670.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G814_ECTSI1.770e-7474.15Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C7Q3_9STRA8.070e-3834.46Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2120contigL-elsbetiae_contig2120:7159..14430 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2120.6467.1mRNA_L-elsbetiae_contig2120.6467.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2120 7159..14533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2120.6467.1 ID=prot_L-elsbetiae_contig2120.6467.1|Name=mRNA_L-elsbetiae_contig2120.6467.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=667bp
MDTRDEELKASLLASFCPILRFDAAEKHFPVCAETFISCSVLLRRPKNPR
QAKKEATRRRTRQADQQDEDDDDDEEEEDAAAHQRRQQEGIQHQQQACAK
CGQRQGWSIPSRGGWGLVALPSGSESWSASALLEEQQRDRLHDFRLEPHC
CIWNGQPGDLSTVPCYAFAELLDPSAMAPFIGRAGLGPVYELKYVFLYGY
NGTTFAVPGTSVGVHTGDLEHVTIRVDAGRRMVLEAFFAAHGTGEGKWVP
SREFHRQVEALEAAAHPGFTADVPLSTREFLEVEASTAGEAGGDGDVPEA
TPAEASGESGVGVRVGGGERLVIYPARNGHASYHMPKRWRRFVGLGDDVC
GGDGTVWRPSPVLLDHPQGITPPWLRFRGRYGGTRSIMTEGFWKCRGEAP
RRCSAEAKYRSLLEEGLVPDRGVRLGLSRRLLNGNGDRGVWLERRRQTQS
RLPLLNMWTRVPGVSSSKPQDEDPPRQAKARTRVHTDLVWLADWGFLRDV
RGGTTDAQGWSYHSSQAAYADTGTSGRSKDSGILAHRSRGRVWFRVAATP
QVAREVEEARRQDRGRHPRVALALAALDVAGRGDTTVTSASLLQTLRDGV
HRRGGTGASPGAREGTPSGTTSSGAAAGGDGAPPGGSPRELDAGRSADEL
CMSFGSVAMRSIGGGS*
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