prot_L-elsbetiae_contig2117.6451.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2117.6451.1
Unique Nameprot_L-elsbetiae_contig2117.6451.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length393
Homology
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Match: D7FLJ6_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ6_ECTSI)

HSP 1 Score: 527 bits (1358), Expect = 3.330e-185
Identity = 279/390 (71.54%), Postives = 316/390 (81.03%), Query Frame = 0
Query:    6 SLALIAAFLAAPAVAVEYTISTCADLADVDDTLVTGLTIDSSTFACDEYTRFRVRNTMSLKATVPAVEFSNFSLKVLGQLTVEPDVIFSGVVDQVKNGGVLSVEEGAAATFMGTSEFSDNTIINKQLGSVSCGEGCTTVSRGLSYVVKKGGAIHNKGVLTFEGDATFARNQVRTDDSDEQGRAGAVSNTGSGSILFKGKLNMEENDAGGFFVGIGGGIYNRGDIVVNGESFFTLNTASDGGVIYQTKIGTMTFNAMATFYDNSVRDFRGGAIDNEGGVMDFNAGSLFEGNAADGSGDGGQGGAIFNGNGGVITLTGSTTFMGNVAFWGGAIYNTD---ENGSGFTRGGDLPVSTTTFPDGAIFVENRAENCPDVNNGDVRNGNNEDCPVV 392
            SL LIA+ LAAPA AVEYT++TCADLADVDDT VT LTID+STFACDEYTRFRVRN M+LKATVPAVEF NFSLKVLG+LTVEPDV+F+GVVDQVKNGGVLSV EGA ATFMGTSEFSDN++  KQ+G VSCG+GCT + RGLSY+VKKGGAIHNKG LTFEGDATF RN+V T+DS EQG+AGA+SNTGSG+ILFK KL M++N+A GFF GIGG IYNRG+IVV GES F+LNT+SDGG IYQT IGTMTFN  ATF +NS  D  GG + N+GGV++ NAGSLFE N A GSGDGG GGAI+N N GV+TL GSTTF  N AF GGAIY +D   ENG         P S TTFPD  +F +N AE+CPDV+NGD  N     CPVV
Sbjct:    5 SLTLIASLLAAPAAAVEYTVATCADLADVDDTQVTSLTIDASTFACDEYTRFRVRNAMTLKATVPAVEFGNFSLKVLGELTVEPDVMFNGVVDQVKNGGVLSVAEGATATFMGTSEFSDNSVAVKQIGPVSCGDGCTRIGRGLSYIVKKGGAIHNKGTLTFEGDATFERNEVHTEDSVEQGKAGAISNTGSGTILFKSKLTMKDNEADGFFEGIGGAIYNRGEIVVEGESLFSLNTSSDGGGIYQTSIGTMTFNGAATFSENSAYDLLGGGLMNDGGVVNINAGSLFELNGASGSGDGGLGGAIYNTNAGVVTLMGSTTFRENAAFMGGAIYTSDGDEENGE--------PASVTTFPDDTVFEDNSAEHCPDVHNGDSDN-----CPVV 381          
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Match: D8LJ44_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ44_ECTSI)

HSP 1 Score: 511 bits (1316), Expect = 8.100e-179
Identity = 275/392 (70.15%), Postives = 315/392 (80.36%), Query Frame = 0
Query:    1 MKPSSSLALIAAFLAAPAVAVEYTISTCADLADVDDTLVTGLTIDSSTFACDEYTRFRVRNTMSLKATVPAVEFSNFSLKVLGQLTVEPDVIFSGVVDQVKNGGVLSVEEGAAATFMGTSEFSDNTIINKQLGSVSCGEGCTTVSRGLSYVVKKGGAIHNKGVLTFEGDATFARNQVRTDDSDEQGRAGAVSNTGSGSILFKGKLNMEENDAGGFFVGIGGGIYNRGDIVVNGESFFTLNTASDGGVIYQTKIGTMTFNAMATFYDNSVRDFRGGAIDNEGGVMDFNAGSLFEGNAADGSGDGGQGGAIFNGNGGVITLTGSTTFMGNVAFWGGAIYNTDENGSGFTRGGDLPVSTTTFPDGAIFVENRAENCPDVNNGDVRNGNNEDCPVV 392
            MKP S L LIA  LAAPA AVEYT++TCADLADVDDT VTGLTID+STFACDEYTRF VRN+M+LKATV AVEF NFSLKVLG+LTVEPDV F+GVVDQVKNGGVLSV EGA +TFMGTSEFSDN++  KQLG+VSCG+GC    RGLSYVVKKGGAIHNKG LTFEGDATF RN V T+DS EQG+AGA+SNTGSG+I FK KL M++N+A GFF G+GG IYNRG+I+V+GES F+LNTASDGG IYQT IG MTFN+MATF +NS  + RGG + N GGV++ NAGSLFE N A GSGDGG GGAI+NGN G +TL GSTTF  N A+ GGAIY  D    G    G+   S TTFPD  +F +NRA+ CPDV +GD     N++CPVV
Sbjct:    1 MKPCS-LTLIAGLLAAPAAAVEYTVATCADLADVDDTQVTGLTIDTSTFACDEYTRFPVRNSMTLKATVAAVEFGNFSLKVLGELTVEPDVTFNGVVDQVKNGGVLSVAEGATSTFMGTSEFSDNSVAVKQLGAVSCGDGCERTGRGLSYVVKKGGAIHNKGTLTFEGDATFERNAVHTEDSVEQGKAGAISNTGSGTIWFKSKLTMKDNEAEGFFEGLGGAIYNRGEIIVDGESLFSLNTASDGGGIYQTPIGKMTFNSMATFSENSAYELRGGGLMNYGGVVNINAGSLFELNGASGSGDGGLGGAIYNGNEGAVTLMGSTTFRENAAYEGGAIYTDD----GSVANGEA-ASVTTFPDDTVFEDNRADFCPDVFDGD-----NDNCPVV 381          
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Match: D7FL58_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL58_ECTSI)

HSP 1 Score: 278 bits (711), Expect = 7.120e-89
Identity = 151/276 (54.71%), Postives = 183/276 (66.30%), Query Frame = 0
Query:  117 MGTSEFSDNTIINKQLGSVSCGEGCTTVSRGLSYVVKKGGAIHNKGVLTFEGDATFARNQVRTDDSDEQGRAGAVSNTGSGSILFKGKLNMEENDAGGFFVGIGGGIYNRGDIVVNGESFFTLNTASDGGVIYQTKIGTMTFNAMATFYDNSVRDFRGGAIDNEGGVMDFNAGSLFEGNAADGSGDGGQGGAIFNGNGGVITLTGSTTFMGNVAFWGGAIYNTDENGSGFTRGGDLPVSTTTFPDGAIFVENRAENCPDVNNGDVRNGNNEDCPVV 392
            MGTSEFS+N++  KQ G +SCG+GCT   RGL+Y+VKKGGAIHNKG LTF+GDATF RN   T+ S+++G  GA+SNTGSG+ILFK KL M++N A   F G+GG IYNRG+I+V G S F+LN A+ GG I+QT IGTMTFN MATF +N   +  GG + N GGV++ NAGSLFE N A  SGDGG GGAIFN                    WGGAIY  D +G         P S TTFPD       RAE CPDV+NGD     +++CPVV
Sbjct:    1 MGTSEFSNNSVAVKQFGRISCGDGCTRSERGLTYIVKKGGAIHNKGTLTFDGDATFERNVAHTESSNQRGNGGAISNTGSGTILFKSKLTMKDNQADANFAGLGGAIYNRGEIIVEGASLFSLNHAAAGGGIHQTSIGTMTFNGMATFSENFAGEPTGGGLTNNGGVVNINAGSLFEHNWASASGDGGFGGAIFNTKXXXXXXXXXXXXXXXXXHWGGAIYTNDADG---------PGSVTTFPDDXXXXXXRAEYCPDVHNGD-----DDNCPVV 262          
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Match: A0A6H5KTD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTD4_9PHAE)

HSP 1 Score: 251 bits (641), Expect = 9.170e-77
Identity = 161/357 (45.10%), Postives = 207/357 (57.98%), Query Frame = 0
Query:   25 ISTCADLADVDDTLVTGLTIDSSTFACDEYTRFRVRNTMSLKATVPAVEFSNFSLKVLGQLTVEPDVIFSGVVDQVKNGGVLSVEEGAAATFMGTSEFSDNTIINKQLGSVSCGEGCTTVSRGLSYVVKKGGAIHNKGVLTFEGDATFARNQVRTDDSDE----QGRAGAVSNTGSGSILFKGKLNMEENDAGGFFVGI-GGGIYNRGDIVVNGESFFTLNTASDGGVIYQTKIGTMTFNAMATFYDNSVRDFRGGAIDNEGGVMDFNAGSLFEGNAADGSGDGGQGGAIFNGNGGVITLTGSTTFMGNVAFWGGAIYNTDENGSGFTRGGDLPVSTT-TFPDGAIFVENRAENCPD 375
            + +C + A +D  + T +TI  + FACDEYTR  +R+ M LK++V  V FSNF+LKV G LTVEPDV+F+GV    KNGGVL +E GA   F GT+EFSDN+II+  +   +  E           +++KGGAIH KG LTFE DATF+ N      +D      G  GA+S    GSI F GKL M +N+A  +F G  GG I+NRGDIVV+GE+ FT N    GG I+Q K  T+ FN   TF  N   D  GG I N GG +  NAGSLF    A+ SGDGG              LTGSTTF  N   WGGA++N+    + FT   +  V  T ++P+  IF +N A+ C D
Sbjct:   26 VGSCTEFAAIDRKVETEVTITEADFACDEYTRLSIRSNMVLKSSVGKVTFSNFALKVYGSLTVEPDVVFTGVSLVEKNGGVLKLELGAVGVFKGTAEFSDNSIISTSIDESTEEE-----------ILRKGGAIHTKGSLTFEKDATFSGNL-----NDRLYYGSGPGGAISVHVKGSIYFMGKLTMTDNEADDYFGGAQGGAIFNRGDIVVDGEAEFTGNIGGRGGAIFQEKWATLVFNDFVTFTSNKCLDTFGGTIANIGGDVTANAGSLFFDGFAENSGDGGLXXXXXXXXXXXXXLTGSTTFRQNYGNWGGAVFNSAVPNAYFTAEDESYVMPTISYPEDTIFEDNDAQYCND 366          
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Match: D7FQG1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG1_ECTSI)

HSP 1 Score: 187 bits (476), Expect = 7.960e-55
Identity = 104/187 (55.61%), Postives = 124/187 (66.31%), Query Frame = 0
Query:  207 MEENDAGGFFVGIGGGIYNRGDIVVNGESFFTLNTASDGGVIYQTKIGTMTFNAMATFYDNSVRDFRGGAIDNEGGVMDFNAGSLFEGNAADGSGDGGQGGAIFNGNGGVITLTGSTTFMGNVAFWGGAIYNTDENGSGFTRGGDLPVSTTTFPDGAIFVENRAEN-CPDVNNGDVRNGNNEDCPVV 392
            M END  G + G+GG IYNRG+I V GES F+ N +SDGG IYQT IG MTFN+MATF+ N   + RGG + N+GGV++ NAGSLFE N A  + DGG+GGAI N NGGV+TL G TTF  N A+WGGAIY  D            P S TTFPD  +F +N A+  CPDV+NGD  N     CPVV
Sbjct:    1 MNENDTDGQYGGLGGAIYNRGEITVEGESLFSENRSSDGGGIYQTSIGIMTFNSMATFFHNVAENLRGGGLMNDGGVVNINAGSLFEQNFAAANADGGRGGAIHNRNGGVVTLMGPTTFRENGAWWGGAIYTDD----------GYPASVTTFPDDTVFEDNSADAYCPDVHNGDDNN-----CPVV 172          
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Match: D7FQG2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQG2_ECTSI)

HSP 1 Score: 149 bits (375), Expect = 1.200e-40
Identity = 81/108 (75.00%), Postives = 90/108 (83.33%), Query Frame = 0
Query:    1 MKPSSSLALIAAFLAAPAVAVEYTISTCADLADVDDTLVTGLTIDSSTFACDEYTRFRVRNTMSLKATVPAVEFSNFSLKVLGQLTVEPDVIFSGVVDQVKNGGVLSV 108
            MKP S L  IA+ LA PA AVEY ++TCADLADVDDT VTGLTID++TFACDEYTRFRVRN+M+LKATV AVEF NFSLKVLG+LTVEPDV F+GVVDQ   G   SV
Sbjct:    1 MKPVS-LTFIASLLATPAAAVEYMVTTCADLADVDDTQVTGLTIDANTFACDEYTRFRVRNSMTLKATVSAVEFGNFSLKVLGELTVEPDVTFNGVVDQSSEGTTPSV 107          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2117.6451.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FLJ6_ECTSI3.330e-18571.54Asn/thr-rich large protein family protein n=1 Tax=... [more]
D8LJ44_ECTSI8.100e-17970.15Asn/thr-rich large protein family protein n=1 Tax=... [more]
D7FL58_ECTSI7.120e-8954.71Asn/thr-rich large protein family protein n=1 Tax=... [more]
A0A6H5KTD4_9PHAE9.170e-7745.10Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FQG1_ECTSI7.960e-5555.61Polymorphic outer membrane protein n=1 Tax=Ectocar... [more]
D7FQG2_ECTSI1.200e-4075.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..392
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.825

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2117contigL-elsbetiae_contig2117:1680..6577 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2117.6451.1mRNA_L-elsbetiae_contig2117.6451.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2117 1680..6577 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2117.6451.1 ID=prot_L-elsbetiae_contig2117.6451.1|Name=mRNA_L-elsbetiae_contig2117.6451.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=393bp
MKPSSSLALIAAFLAAPAVAVEYTISTCADLADVDDTLVTGLTIDSSTFA
CDEYTRFRVRNTMSLKATVPAVEFSNFSLKVLGQLTVEPDVIFSGVVDQV
KNGGVLSVEEGAAATFMGTSEFSDNTIINKQLGSVSCGEGCTTVSRGLSY
VVKKGGAIHNKGVLTFEGDATFARNQVRTDDSDEQGRAGAVSNTGSGSIL
FKGKLNMEENDAGGFFVGIGGGIYNRGDIVVNGESFFTLNTASDGGVIYQ
TKIGTMTFNAMATFYDNSVRDFRGGAIDNEGGVMDFNAGSLFEGNAADGS
GDGGQGGAIFNGNGGVITLTGSTTFMGNVAFWGGAIYNTDENGSGFTRGG
DLPVSTTTFPDGAIFVENRAENCPDVNNGDVRNGNNEDCPVV*
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