prot_L-elsbetiae_contig2112.6426.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2112.6426.1
Unique Nameprot_L-elsbetiae_contig2112.6426.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length251
Homology
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BLAST of mRNA_L-elsbetiae_contig2112.6426.1 vs. uniprot
Match: A0A6H5JG92_9PHAE (BRCT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG92_9PHAE)

HSP 1 Score: 88.6 bits (218), Expect = 2.590e-16
Identity = 45/84 (53.57%), Postives = 56/84 (66.67%), Query Frame = 0 
Query:  137 LSPGRWTYEAMVPFVRSEGWKCADGEGFHTWFLVSQAAE--GGRKTVDYLVTEEEVVDFVRRDR----HVLARYEAYCQGAVRA 214
            L P R  Y AM+PF+RSEGWKCADG+GFHTWF V  A E   G+K VDYLV+EEEVV +V R++     V  +    C+  +RA
Sbjct:  148 LDPARLEYPAMIPFLRSEGWKCADGKGFHTWFFVVPAKETHDGKKRVDYLVSEEEVVRYVLRNKGAELRVRRKVPHVCEVTLRA 231
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BLAST of mRNA_L-elsbetiae_contig2112.6426.1 vs. uniprot
Match: D7FW83_ECTSI (BRCT domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW83_ECTSI)

HSP 1 Score: 79.3 bits (194), Expect = 3.860e-13
Identity = 39/80 (48.75%), Postives = 53/80 (66.25%), Query Frame = 0 
Query:  138 SPGRWTYEAMVPFVRSEGWKCADGEGFHTWFLVSQAAEG--GRKTVDYLVTEEEVVDFVRRDRHVLARYEAYCQGAVRAA 215
            SP   TY+AM+ F+  EGWKC  G+G HTWF +    +G  GR  +D+LV+EEEVV  VR D+  L+RYEA+ +   +AA
Sbjct:  772 SPEWLTYKAMISFLDVEGWKCVLGKGLHTWFYLLPGKKGRNGRYGLDFLVSEEEVVQHVRCDQPALSRYEAFLKAEAKAA 851
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2112.6426.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JG92_9PHAE2.590e-1653.57BRCT domain-containing protein n=1 Tax=Ectocarpus ... [more]
D7FW83_ECTSI3.860e-1348.75BRCT domain-containing protein n=2 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2112contigL-elsbetiae_contig2112:346..2507 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2112.6426.1mRNA_L-elsbetiae_contig2112.6426.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2112 346..2507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2112.6426.1 ID=prot_L-elsbetiae_contig2112.6426.1|Name=mRNA_L-elsbetiae_contig2112.6426.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=251bp
RARTHFTLGEERLHVSRIAGVTMGTSGSKPSPVLSDGISESEGNGTDAHA
GATGAPHPDLRRPPAKGAGQVKGEAKGKAKKRTKRAPPIAAHGPQEAERA
AKNDTAGKIAAAAAAAAGAGAGAGAGTGAAGAGAAPLSPGRWTYEAMVPF
VRSEGWKCADGEGFHTWFLVSQAAEGGRKTVDYLVTEEEVVDFVRRDRHV
LARYEAYCQGAVRAAGTGRSKQGGSGGVTGPGDRRVVASAASAAADGTRS
P
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