prot_L-elsbetiae_contig2076.6266.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2076.6266.1
Unique Nameprot_L-elsbetiae_contig2076.6266.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length100
Homology
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BLAST of mRNA_L-elsbetiae_contig2076.6266.1 vs. uniprot
Match: A0A6H5L0M1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M1_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 1.810e-14
Identity = 40/51 (78.43%), Postives = 47/51 (92.16%), Query Frame = 0 
Query:   48 LEEDNRQLEAIVSRLGGQDARKLKAQLFSLLASPSMGRLGDSSTFSPQLTP 98
            LEEDNR+LEA+VSRLGGQDAR+LKAQLFSLLASPSMG+LG+ +  S QL+P
Sbjct:  610 LEEDNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGEGNP-STQLSP 659
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BLAST of mRNA_L-elsbetiae_contig2076.6266.1 vs. uniprot
Match: D8LGV8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV8_ECTSI)

HSP 1 Score: 77.0 bits (188), Expect = 2.450e-14
Identity = 56/98 (57.14%), Postives = 64/98 (65.31%), Query Frame = 0 
Query:    1 MAAMALAAMTQELSVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEEDNRQLEAIVSRLGGQDARKLKAQLFSLLASPSMGRLGDSSTFSPQLTP 98
            MAAMA+AAMTQEL+V                         XXXXXXX    NR+LEA+VSRLGGQDAR+LKAQLFSLLASPSMG+LG  +  S QL+P
Sbjct:  517 MAAMAMAAMTQELTVMKHSLQKEVESMRNELERASDDSRRXXXXXXXXXXXNRRLEAVVSRLGGQDARRLKAQLFSLLASPSMGQLGQGNP-STQLSP 613
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2076.6266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L0M1_9PHAE1.810e-1478.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LGV8_ECTSI2.450e-1457.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 17..58
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..99
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2076contigL-elsbetiae_contig2076:10829..12048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2076.6266.1mRNA_L-elsbetiae_contig2076.6266.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2076 10829..12051 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2076.6266.1 ID=prot_L-elsbetiae_contig2076.6266.1|Name=mRNA_L-elsbetiae_contig2076.6266.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=100bp
MAAMALAAMTQELSVMKQSLQAEVTSMKTELKRASDDSRRLTDKLGRLEE
DNRQLEAIVSRLGGQDARKLKAQLFSLLASPSMGRLGDSSTFSPQLTPT*
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