Homology
BLAST of mRNA_L-elsbetiae_contig2061.6214.1 vs. uniprot
Match: D8LRE0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRE0_ECTSI) HSP 1 Score: 288 bits (737), Expect = 1.140e-97 Identity = 145/171 (84.80%), Postives = 157/171 (91.81%), Query Frame = 0 Query: 1 MSEEAKTSEVNVAMPMSDVHADTQPKVSKFDQSKNPIPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLEMKMCGKTYGIGCGNSLEDVLLISGCILALWSFILGVSGLLLKSAIDTDRNHTALWVYFWIFILGAFLLGGMIATGQVERFRGEAEAAQKQHDEDEAKAMAA 171
MSEEAKT+EV V+MP +D+HADTQ +VSKFDQSKNPIPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLE+K GKT+GIGCGNSLEDVLLI GCILALWSF+LGVSGLLLKSAIDTD HTALWVYFW+FILG FLLGGMIATGQVERFR E AA+KQHD+D A AM+A
Sbjct: 1 MSEEAKTNEVAVSMPKADIHADTQQEVSKFDQSKNPIPKVVPPRGSKDARSFRPSTLAEINMMNRYEPLELKCGGKTFGIGCGNSLEDVLLIMGCILALWSFVLGVSGLLLKSAIDTDLRHTALWVYFWLFILGCFLLGGMIATGQVERFRSERAAAEKQHDDDAAAAMSA 171
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2061.6214.1 vs. uniprot
Analysis Date: 2022-09-16 ( Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match Name | E-value | Identity | Description | |
D8LRE0_ECTSI | 1.140e-97 | 84.80 | Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... | [more] |
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
None | No IPR available | COILS | Coil | Coil | coord: 147..167 |
None | No IPR available | PHOBIUS | NON_CYTOPLASMIC_DOMAIN | Non cytoplasmic domain | coord: 112..122 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 1..88 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 123..143 |
None | No IPR available | PHOBIUS | CYTOPLASMIC_DOMAIN | Cytoplasmic domain | coord: 144..171 |
None | No IPR available | PHOBIUS | TRANSMEMBRANE | Transmembrane region | coord: 89..111 |
None | No IPR available | TMHMM | TMhelix | | coord: 89..111 |
None | No IPR available | TMHMM | TMhelix | | coord: 123..145 |
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_L-elsbetiae_contig2061.6214.1 ID=prot_L-elsbetiae_contig2061.6214.1|Name=mRNA_L-elsbetiae_contig2061.6214.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=172bp MSEEAKTSEVNVAMPMSDVHADTQPKVSKFDQSKNPIPKVVPPRGSKDAR SFRPSTLAEINMMNRYEPLEMKMCGKTYGIGCGNSLEDVLLISGCILALW SFILGVSGLLLKSAIDTDRNHTALWVYFWIFILGAFLLGGMIATGQVERF RGEAEAAQKQHDEDEAKAMAA* back to top
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