prot_L-elsbetiae_contig2042.6152.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2042.6152.1
Unique Nameprot_L-elsbetiae_contig2042.6152.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length229
Homology
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BLAST of mRNA_L-elsbetiae_contig2042.6152.1 vs. uniprot
Match: D7FXZ6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXZ6_ECTSI)

HSP 1 Score: 189 bits (480), Expect = 1.570e-51
Identity = 139/247 (56.28%), Postives = 160/247 (64.78%), Query Frame = 0 
Query:   10 EPLDGEN-GSYRSDGEGDEYDKSTT------DGNEEPA-----------VVLAP--FPMSEERESLGFLRATRRLALPGVGFDEGKDDGSVVAVAALDLFGLLLVSSATGVLVYGTESLSSAAFGAAGXXXXXXXXDPAAAPSGPVVPARADVALGGRPSCMVVSEDNLRVAVALGDKILVFDAATLAGGSDI---PLETLSLPAAP-------PPRALSWGRARSRD-HHLLLVVRGDKKAVVARV 225
            EPLDG++ G     G  DEYD S+T      DG+EE A              AP   P SE RESLGFLRA+R+LALPG GFD   DDG VVA+AALD FGLLLVSSATG+LVY  E LSSAAFG  G XXXXXXXDPA+      VP RADVAL GRPS MV S DNLRVA+A+G+K+LV D A+L  G+     P+ T++L +         PPRALSWGR  S D   LLLVVR D+ A VAR+
Sbjct:   10 EPLDGDDYGGSGDHGYDDEYDDSSTADGNSLDGDEEAAGTGSAANGGSSSAAAPVTLPESEYRESLGFLRASRKLALPGTGFD-AADDGRVVALAALDRFGLLLVSSATGILVYAIEDLSSAAFGQGGQXXXXXXXDPASP-----VPVRADVALAGRPSRMVASRDNLRVAIAVGNKVLVLDTASLVNGAAAAAAPVATVALSSPDAGDSGDLPPRALSWGRKSSGDGDDLLLVVRADRSAAVARI 250
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2042.6152.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FXZ6_ECTSI1.570e-5156.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2042contigL-elsbetiae_contig2042:12204..17903 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2042.6152.1mRNA_L-elsbetiae_contig2042.6152.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2042 12178..17903 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2042.6152.1 ID=prot_L-elsbetiae_contig2042.6152.1|Name=mRNA_L-elsbetiae_contig2042.6152.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
MATLGGDGGEPLDGENGSYRSDGEGDEYDKSTTDGNEEPAVVLAPFPMSE
ERESLGFLRATRRLALPGVGFDEGKDDGSVVAVAALDLFGLLLVSSATGV
LVYGTESLSSAAFGAAGQQQQQQRQDPAAAPSGPVVPARADVALGGRPSC
MVVSEDNLRVAVALGDKILVFDAATLAGGSDIPLETLSLPAAPPPRALSW
GRARSRDHHLLLVVRGDKKAVVARVPGGG
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