prot_L-elsbetiae_contig2041.6148.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2041.6148.1
Unique Nameprot_L-elsbetiae_contig2041.6148.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length127
Homology
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BLAST of mRNA_L-elsbetiae_contig2041.6148.1 vs. uniprot
Match: A0A6H5JCE6_9PHAE (2OG-FeII_Oxy_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCE6_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 3.190e-9
Identity = 51/132 (38.64%), Postives = 63/132 (47.73%), Query Frame = 0 
Query:    1 MGRSRICGVCYLA---LTVPVVTVTSWGGSGIYGGSTSXXXXXTRRCATRSVR---SGAWGVATQKRKRTGVPSSSSSSVLVPRRTSSSLKVSDAGVDIGLDSDLELGEGEELLGTIDVSPEEIAELFAKPT 126
            M R  +   C+LA   +  P   V SWG S     ++S     +  C T S      G W VA    +               RR  S LK    G D+G+   +ELGEGEELLGT+DVSPEE+AE FAKPT
Sbjct:    1 MPRPSVRATCFLAAVSMNQPQ-GVISWGAS--LKAASSRHGAGSIPCTTSSTTCLGGGVWNVAAPSER---------------RRRLSRLKAGGVGSDVGVGXXMELGEGEELLGTVDVSPEEVAEFFAKPT 114
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2041.6148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JCE6_9PHAE3.190e-938.642OG-FeII_Oxy_3 domain-containing protein n=1 Tax=E... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..126
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.637
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2041contigL-elsbetiae_contig2041:21630..22010 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2041.6148.1mRNA_L-elsbetiae_contig2041.6148.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2041 21177..22010 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2041.6148.1 ID=prot_L-elsbetiae_contig2041.6148.1|Name=mRNA_L-elsbetiae_contig2041.6148.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=127bp
MGRSRICGVCYLALTVPVVTVTSWGGSGIYGGSTSGGGGGTRRCATRSVR
SGAWGVATQKRKRTGVPSSSSSSVLVPRRTSSSLKVSDAGVDIGLDSDLE
LGEGEELLGTIDVSPEEIAELFAKPT*
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