prot_L-elsbetiae_contig20353.6123.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig20353.6123.1
Unique Name	prot_L-elsbetiae_contig20353.6123.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	145

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: D8LT33_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT33_ECTSI)

HSP 1 Score: 213 bits (542), Expect = 2.050e-66
Identity = 113/145 (77.93%), Postives = 125/145 (86.21%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQ-QAYKAPYRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTLRTAGAGEFR 144
            M+VVKTRMQLQ ELVLR     AG+S+   Q Y+APY+NA HAFYKICRDEG RGIQAGLLPGLMYQ+LMNGTRLSLFAPVQ ALGV DAE+ GK+ FF RNLAAGAACGA GAL+GSP+FL+KARLQSQS AH+LRTAG GEFR
Sbjct:   78 MDVVKTRMQLQSELVLR----KAGQSQQTTQVYRAPYKNALHAFYKICRDEGVRGIQAGLLPGLMYQILMNGTRLSLFAPVQKALGV-DAENKGKIGFFFRNLAAGAACGAAGALIGSPVFLVKARLQSQSKAHSLRTAGGGEFR 217

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A6H5L6Z3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6Z3_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 7.480e-65
Identity = 110/145 (75.86%), Postives = 122/145 (84.14%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQ-QAYKAPYRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTLRTAGAGEFR 144
            M+VVKTRMQLQ ELVLR     AG+SR   Q Y+APY+NA HAFYKICRDEG RGIQAGLLPG+MYQ+LMNGTRLSLFAPVQ  LGV D E+ GK+ FF RNLAAGAACGA GAL+ SP+FL+KARLQSQS AH+LRTAG GEFR
Sbjct:    1 MDVVKTRMQLQSELVLR----KAGQSRQMTQVYRAPYKNALHAFYKICRDEGVRGIQAGLLPGIMYQILMNGTRLSLFAPVQKVLGV-DVENKGKIGFFFRNLAAGAACGAAGALIASPVFLVKARLQSQSKAHSLRTAGGGEFR 140

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A835YMV3_9STRA (Solute carrier family 25 member 34 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMV3_9STRA)

HSP 1 Score: 148 bits (374), Expect = 1.410e-41
Identity = 84/143 (58.74%), Postives = 100/143 (69.93%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAPYRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTLRTAGAGEF 143
            MEVVKTR QLQGEL          KS   + YK  +     AFYKI RDEG RGIQAGLLPG++YQ  MNGTRL +FAP+Q  L   DA+++G+V+FF +NLAAGA  GA GA VGSP FL+KARLQ QS+ H +R+AGA  F
Sbjct:    1 MEVVKTRFQLQGELA---------KSSPNRIYKHVF----DAFYKIARDEGLRGIQAGLLPGILYQSTMNGTRLGMFAPLQRFLKA-DAKTDGQVSFFFKNLAAGAISGACGAAVGSPFFLVKARLQGQSSVHKIRSAGAEVF 129

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A484E3G6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484E3G6_BRELC)

HSP 1 Score: 127 bits (318), Expect = 6.140e-33
Identity = 71/132 (53.79%), Postives = 84/132 (63.64%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAPYRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTA 132
            MEV+KTRMQLQGEL      G     R        YRN  HAFY ICR EG RGIQ GLLPG+ YQ+ MNG RL LFAP+Q  +G  D  S   V F +RN+ A A  G +GA +GSP +L+KAR+Q+ STA
Sbjct:   27 MEVIKTRMQLQGELAHNVTSGSVPVVR--------YRNFAHAFYTICRTEGLRGIQRGLLPGISYQIFMNGPRLGLFAPLQKVVGATDPTS---VWFPVRNVCAAATSGMIGACIGSPFYLVKARIQAASTA 147

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A024UT24_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UT24_9STRA)

HSP 1 Score: 125 bits (313), Expect = 5.290e-32
Identity = 73/137 (53.28%), Postives = 86/137 (62.77%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAP--YRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTL 135
            MEVVKTRMQLQGEL  +G               AP  YRN+ HAFY ICR EG  GIQ GL+ G+ YQ  MNG RL  F  +Q   G  D       +F LRN+AAGA  GA+GA++GSP FL+KARLQ+QSTA T+
Sbjct:   35 MEVVKTRMQLQGELASKG---------------APIVYRNSIHAFYTICRLEGIAGIQRGLVAGMCYQSFMNGARLGFFEKLQQVFGATDPNH---FSFPLRNMAAGATSGAVGAMMGSPFFLVKARLQAQSTAATI 153

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A6G0XPW9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XPW9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.940e-31
Identity = 72/137 (52.55%), Postives = 85/137 (62.04%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAP--YRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTL 135
            MEVVKTRMQLQGEL  +G               AP  YRN+ HAFY ICR EG  GIQ GL  G+ YQ  MNG RL LF  +Q   G  D  S    ++ LRN+ AGA  GA+GA++GSP FL+KARLQ+QS A T+
Sbjct:   33 MEVVKTRMQLQGELAAKG---------------APIVYRNSFHAFYTICRLEGIAGIQRGLTAGMFYQTFMNGARLGLFEHLQRVYGATDPTS---YSYPLRNMLAGATSGAIGAIMGSPFFLVKARLQAQSNASTI 151

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A6A5AIL5_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AIL5_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.120e-31
Identity = 72/134 (53.73%), Postives = 84/134 (62.69%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAP--YRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTA 132
            MEVVKTRMQLQGEL  RG               AP  YRN+ HAFY ICR EG  GIQ GL+ G+ YQ  MNG RL  F  +Q   G  D       +F LRN+AAGA  GA+GA++GSP FL+KARLQ+QS+A
Sbjct:   56 MEVVKTRMQLQGELAARG---------------APIVYRNSFHAFYTICRLEGIAGIQRGLVAGMFYQSFMNGARLGFFEQLQQVYGATDPNH---YSFPLRNMAAGATSGALGAIMGSPFFLVKARLQAQSSA 171

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A1V9Z179_9STRA (Uncharacterized protein n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z179_9STRA)

HSP 1 Score: 119 bits (299), Expect = 4.080e-30
Identity = 71/137 (51.82%), Postives = 84/137 (61.31%), Query Frame = 0

Query:    1 MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAP--YRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTL 135
            MEVVKTRMQLQGEL   G               AP  YRN+ HAFY I R EG RGIQ GL+ G+ YQ +MNG RL  F P+Q   G  D       +F  RN+ AGA  GA+GA++GSP FL+KARLQ+QS A T+
Sbjct:   32 MEVVKTRMQLQGELAATG---------------APTVYRNSFHAFYTIARAEGVRGIQRGLVAGMAYQTVMNGVRLGGFEPLQKIYGATDPNH---YSFVPRNMLAGATSGAIGAMLGSPFFLVKARLQAQSNATTI 150

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: D0MSA3_PHYIT (Mitochondrial Carrier (MC) Family n=2 Tax=Phytophthora TaxID=4783 RepID=D0MSA3_PHYIT)

HSP 1 Score: 116 bits (290), Expect = 7.410e-30
Identity = 68/135 (50.37%), Postives = 82/135 (60.74%), Query Frame = 0

Query:    1 MEVVKTRMQLQGEL---VLRGGGGDAGKSRGQQAYKAPYRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTA 132
            MEV+KTRMQLQGEL   V RG            A    YRN  HAFY I R EG RGIQ GL PG+ YQ+ MNG RL LF P+Q   G  D  +    +F +RN+ A A  G +GA +GSP FL+KAR+Q+ S+A
Sbjct:    1 MEVIKTRMQLQGELAHNVTRGA-----------APVVQYRNFAHAFYTIGRTEGLRGIQRGLGPGISYQIFMNGPRLGLFEPMQKVFGATDPTA---YSFPIRNVCAAATSGMIGAFIGSPFFLVKARIQAASSA 121

[Close]

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Match: A0A662XF87_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XF87_9STRA)

HSP 1 Score: 120 bits (302), Expect = 1.430e-29
Identity = 72/141 (51.06%), Postives = 87/141 (61.70%), Query Frame = 0

Query:    1 MEVVKTRMQLQGEL---VLRGGGGDAGKSRGQQAYKAP---YRNAPHAFYKICRDEGFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLRNLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTL 135
            MEVVKTRMQLQGEL   + RGG           A   P   YRN  HAFY I R EG RGIQ GL PG+ YQV MNG RL LF P+Q   G  D  +    +F +RN+ A A  G +GA +GSP FL+KAR+Q+ S+AH++
Sbjct:  304 MEVVKTRMQLQGELAHNLTRGG-----------AVATPVMQYRNFAHAFYTIGRTEGLRGIQRGLGPGISYQVFMNGPRLGLFEPLQKVYGATDPTA---YSFPIRNVCAAATSGMIGAFIGSPFFLVKARIQAASSAHSI 430

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig20353.6123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D8LT33_ECTSI	2.050e-66	77.93	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L6Z3_9PHAE	7.480e-65	75.86	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
A0A835YMV3_9STRA	1.410e-41	58.74	Solute carrier family 25 member 34 n=1 Tax=Tribone...	[more]
A0A484E3G6_BRELC	6.140e-33	53.79	Uncharacterized protein n=1 Tax=Bremia lactucae Ta...	[more]
A0A024UT24_9STRA	5.290e-32	53.28	Uncharacterized protein n=4 Tax=Aphanomyces invada...	[more]
A0A6G0XPW9_9STRA	1.940e-31	52.55	Uncharacterized protein n=1 Tax=Aphanomyces euteic...	[more]
A0A6A5AIL5_9STRA	3.120e-31	53.73	Uncharacterized protein n=3 Tax=Aphanomyces astaci...	[more]
A0A1V9Z179_9STRA	4.080e-30	51.82	Uncharacterized protein n=3 Tax=Saprolegniaceae Ta...	[more]
D0MSA3_PHYIT	7.410e-30	50.37	Mitochondrial Carrier (MC) Family n=2 Tax=Phytopht...	[more]
A0A662XF87_9STRA	1.430e-29	51.06	Uncharacterized protein n=1 Tax=Nothophytophthora ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR018108	Mitochondrial substrate/solute carrier	PFAM	PF00153	Mito_carr	coord: 98..134 e-value: 4.0E-6 score: 26.6 coord: 1..78 e-value: 2.3E-7 score: 30.6
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 96..144 score: 7.946
IPR018108	Mitochondrial substrate/solute carrier	PROSITE	PS50920	SOLCAR	coord: 1..83 score: 15.09
IPR023395	Mitochondrial carrier domain superfamily	GENE3D	1.50.40.10		coord: 1..142 e-value: 2.8E-24 score: 87.3
IPR023395	Mitochondrial carrier domain superfamily	SUPERFAMILY	103506	Mitochondrial carrier	coord: 1..132
None	No IPR available	PANTHER	PTHR45928	FAMILY NOT NAMED	coord: 1..133
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 102..122
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 123..144
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..101

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig20353	contig	L-elsbetiae_contig20353:258..1053 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig20353.6123.1	mRNA_L-elsbetiae_contig20353.6123.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig20353 258..1053 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig20353.6123.1 ID=prot_L-elsbetiae_contig20353.6123.1|Name=mRNA_L-elsbetiae_contig20353.6123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=145bp
MEVVKTRMQLQGELVLRGGGGDAGKSRGQQAYKAPYRNAPHAFYKICRDE
GFRGIQAGLLPGLMYQVLMNGTRLSLFAPVQAALGVVDAESNGKVAFFLR
NLAAGAACGAMGALVGSPLFLIKARLQSQSTAHTLRTAGAGEFR*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR018108	Mitochondrial_sb/sol_carrier
IPR023395	Mt_carrier_dom_sf