prot_L-elsbetiae_contig20108.6047.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20108.6047.1
Unique Nameprot_L-elsbetiae_contig20108.6047.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length120
Homology
BLAST of mRNA_L-elsbetiae_contig20108.6047.1 vs. uniprot
Match: A0A6H5KZ70_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ70_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 1.480e-23
Identity = 66/124 (53.23%), Postives = 78/124 (62.90%), Query Frame = 0
Query:    1 MCCWQEW-IPEAKGVGIGAKRRLREIQQLQQIASVCLGIEHLMNKRRRATTGAGGAARARVSPQGQQTRPLCP----DSGDATRPPHXXXXXPQRHHPHQALSCRLCDSTLRVLSIARAHRKRC 119
            MC  +EW  PEA+     AKRRL+E+Q LQ +ASVC+GIEHLMNKRRR+T G GGAAR    P GQQTR        D+GD+    H         H H + SCRLC+STLRVLS A  H +RC
Sbjct:    1 MCSGREWPTPEARPRRSDAKRRLQEVQDLQ-VASVCMGIEHLMNKRRRSTKGRGGAARV-SPPVGQQTRLFRDKSNGDAGDSCSGDHQCGGD----HDHPS-SCRLCESTLRVLSTALLHVRRC 117          
BLAST of mRNA_L-elsbetiae_contig20108.6047.1 vs. uniprot
Match: D7G0D1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0D1_ECTSI)

HSP 1 Score: 95.1 bits (235), Expect = 8.900e-22
Identity = 69/125 (55.20%), Postives = 80/125 (64.00%), Query Frame = 0
Query:    1 MCCWQEW-IPEAKGVGIGAKRRLREIQQLQQIASVCLGIEHLMNKRRRATTGAGGAARARVSPQGQQTRPL----CPDSGDATRPPHXXXXXPQRHHPHQALSCRLCDSTLRVLSIARAHRKRCR 120
            MC  +EW  PEA+     AKRRL+E+Q LQ +ASVC+GIEHLMNKRRR+T   GGAAR    P GQQ R        D+GD+    H XXXX    HP    SCRLC+STLRVLS A  H +RCR
Sbjct:    1 MCSGREWPTPEARPRRGDAKRRLQEVQDLQ-VASVCMGIEHLMNKRRRSTKRRGGAARV-FPPVGQQARLFRDKSSDDAGDSCGGDHQXXXXXD--HPS---SCRLCESTLRVLSTALLHVRRCR 118          
BLAST of mRNA_L-elsbetiae_contig20108.6047.1 vs. uniprot
Match: A0A6H5KLU7_9PHAE (C2H2-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU7_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 2.140e-21
Identity = 64/119 (53.78%), Postives = 71/119 (59.66%), Query Frame = 0
Query:    3 CWQEW-IPEAKGVGIGAKRRLREIQQLQQIASVCLGIEHLMNKRRRATTGAGGAARARVSPQGQQTRPLCPDSGDATRPPHXXXXXPQRHHPHQALSCRLCDSTLRVLSIARAHRKRCR 120
            C  EW IPEA+     AKRRL+EIQ+LQ +ASVCLGIEHLMNKRR+   GA    R    P GQQ   L  +SGDA            R H H    CRLC+STLRVLS A  H KRCR
Sbjct:    2 CSGEWLIPEARVRRNDAKRRLQEIQELQ-VASVCLGIEHLMNKRRKCAKGAATRVRP-APPAGQQQARLSRESGDAR----DSCSSDGRDHQHP---CRLCESTLRVLSTALLHVKRCR 111          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20108.6047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KZ70_9PHAE1.480e-2353.23C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
D7G0D1_ECTSI8.900e-2255.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KLU7_9PHAE2.140e-2153.78C2H2-type domain-containing protein n=1 Tax=Ectoca... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20108contigL-elsbetiae_contig20108:1075..2615 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20108.6047.1mRNA_L-elsbetiae_contig20108.6047.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20108 1075..2615 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20108.6047.1 ID=prot_L-elsbetiae_contig20108.6047.1|Name=mRNA_L-elsbetiae_contig20108.6047.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=120bp
MCCWQEWIPEAKGVGIGAKRRLREIQQLQQIASVCLGIEHLMNKRRRATT
GAGGAARARVSPQGQQTRPLCPDSGDATRPPHHYHHHPQRHHPHQALSCR
LCDSTLRVLSIARAHRKRCR
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