prot_L-elsbetiae_contig20104.6045.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig20104.6045.1
Unique Nameprot_L-elsbetiae_contig20104.6045.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length60
Homology
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: D7FZB3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FZB3_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 1.480e-22
Identity = 46/60 (76.67%), Postives = 55/60 (91.67%), Query Frame = 0
Query:    1 KECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRFSS 60
            +ECPD+FFAGNQPQFATS+LEGA G K  R+VCVPAFA+TGQAALL+L++L+CTPL FSS
Sbjct:  414 EECPDIFFAGNQPQFATSILEGADGHK-GRVVCVPAFAATGQAALLNLESLECTPLNFSS 472          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A0A835YHI6_9STRA (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YHI6_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 5.540e-16
Identity = 38/66 (57.58%), Postives = 49/66 (74.24%), Query Frame = 0
Query:    1 KECPDVFFAGNQPQFATSLLEGASGQK--------QARMVCVPAFASTGQAALLDLQTLDCTPLRF 58
            +ECP VFFAGNQP+FAT L+EG  GQ+        Q R+VCVP+FA+TG+  L+DL TL+ TPL+F
Sbjct:  474 EECPHVFFAGNQPRFATRLVEGHDGQQKGLLNRAAQVRVVCVPSFATTGEVVLIDLDTLEATPLQF 539          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A9VBR8_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VBR8_MONBE)

HSP 1 Score: 73.2 bits (178), Expect = 1.130e-13
Identity = 36/59 (61.02%), Postives = 42/59 (71.19%), Query Frame = 0
Query:    2 ECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRFSS 60
            +CP VFFAGNQP+FAT    G  GQK  R+VCVP F+ T  A LLDL TL+ TPL FS+
Sbjct:  404 DCPHVFFAGNQPEFATKECSGPDGQK-VRLVCVPDFSKTATAVLLDLHTLEATPLCFSN 461          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A0A7R9PML2_TIMGE (Hypothetical protein n=1 Tax=Timema genevievae TaxID=629358 RepID=A0A7R9PML2_TIMGE)

HSP 1 Score: 68.9 bits (167), Expect = 2.720e-13
Identity = 30/56 (53.57%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    2 ECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLR 57
            ECPDV+FAGNQP+F T L EG  GQ+  R++C+P+F  T    ++DL TL+ TP R
Sbjct:   79 ECPDVYFAGNQPRFQTKLYEGPKGQR-VRLICIPSFIKTHSCVMVDLATLEVTPFR 133          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: F2TYM9_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TYM9_SALR5)

HSP 1 Score: 72.0 bits (175), Expect = 2.780e-13
Identity = 33/58 (56.90%), Postives = 43/58 (74.14%), Query Frame = 0
Query:    3 CPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRFSS 60
            CP V+FAGNQP FAT L+ G  GQ Q R+VCVP+F+ T  A LL+L TL+C P++F +
Sbjct:  399 CPHVYFAGNQPSFATKLVTGPEGQ-QVRLVCVPSFSDTHTAVLLNLATLECEPIQFDA 455          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A0A067QYD2_ZOONE (DNA polymerase delta subunit 2 n=1 Tax=Zootermopsis nevadensis TaxID=136037 RepID=A0A067QYD2_ZOONE)

HSP 1 Score: 71.2 bits (173), Expect = 5.240e-13
Identity = 30/59 (50.85%), Postives = 43/59 (72.88%), Query Frame = 0
Query:    2 ECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRFSS 60
            ECPD++FAGNQPQF + L EG  GQ Q R++C+PAF+ T    +++L+ LDC  +RF +
Sbjct:  403 ECPDIYFAGNQPQFQSKLYEGPEGQ-QVRLICIPAFSKTHSCVVVNLKNLDCYTVRFDA 460          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A0A6S7FSH6_PARCT (DNA polymerase delta subunit 2 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FSH6_PARCT)

HSP 1 Score: 70.1 bits (170), Expect = 1.340e-12
Identity = 32/60 (53.33%), Postives = 45/60 (75.00%), Query Frame = 0
Query:    1 KECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRFSS 60
            KECP V+F GNQP+FA   +EG++GQK A ++ VP+F  +G   LL+L+TL+C P+ FSS
Sbjct:  403 KECPHVYFVGNQPEFAQDSIEGSAGQKVA-IIMVPSFTQSGCCVLLNLRTLECQPIMFSS 461          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A0A4P9WRA0_9FUNG (DNA polymerase alpha/epsilon subunit B-domain-containing protein n=1 Tax=Blyttiomyces helicus TaxID=388810 RepID=A0A4P9WRA0_9FUNG)

HSP 1 Score: 69.3 bits (168), Expect = 2.490e-12
Identity = 33/56 (58.93%), Postives = 43/56 (76.79%), Query Frame = 0
Query:    4 PDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRFS 59
            P V+F GNQP+F TSL+EG  G  Q R+V VP+F++TG  A++DL TLDCTP+ FS
Sbjct:  398 PHVYFIGNQPEFETSLVEGPDGS-QTRVVLVPSFSTTGAVAVVDLATLDCTPVVFS 452          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: F9XER7_ZYMTI (Uncharacterized protein n=4 Tax=Zymoseptoria TaxID=1047167 RepID=F9XER7_ZYMTI)

HSP 1 Score: 69.3 bits (168), Expect = 2.520e-12
Identity = 32/58 (55.17%), Postives = 42/58 (72.41%), Query Frame = 0
Query:    1 KECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLRF 58
            KECP V+F GNQP+F TS++EG  GQK  R+V VP F  TG+  LLD++TLD   ++F
Sbjct:  440 KECPHVYFVGNQPKFETSVIEGPHGQK-VRLVAVPKFKETGEIVLLDMETLDAEVVKF 496          
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Match: A0A7R9E6C0_9NEOP (Hypothetical protein n=1 Tax=Timema monikensis TaxID=170555 RepID=A0A7R9E6C0_9NEOP)

HSP 1 Score: 69.3 bits (168), Expect = 2.540e-12
Identity = 31/56 (55.36%), Postives = 40/56 (71.43%), Query Frame = 0
Query:    2 ECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQTLDCTPLR 57
            ECPDV+FAGNQP+F T L EG  GQ+  R+VC+P+F  T    ++DL TL+ TP R
Sbjct:  564 ECPDVYFAGNQPRFQTKLYEGPKGQR-VRLVCIPSFIKTHSCVMVDLATLEVTPFR 618          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig20104.6045.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZB3_ECTSI1.480e-2276.67Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YHI6_9STRA5.540e-1657.58DNA polymerase alpha/epsilon subunit B-domain-cont... [more]
A9VBR8_MONBE1.130e-1361.02Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A7R9PML2_TIMGE2.720e-1353.57Hypothetical protein n=1 Tax=Timema genevievae Tax... [more]
F2TYM9_SALR52.780e-1356.90Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A067QYD2_ZOONE5.240e-1350.85DNA polymerase delta subunit 2 n=1 Tax=Zootermopsi... [more]
A0A6S7FSH6_PARCT1.340e-1253.33DNA polymerase delta subunit 2 n=1 Tax=Paramuricea... [more]
A0A4P9WRA0_9FUNG2.490e-1258.93DNA polymerase alpha/epsilon subunit B-domain-cont... [more]
F9XER7_ZYMTI2.520e-1255.17Uncharacterized protein n=4 Tax=Zymoseptoria TaxID... [more]
A0A7R9E6C0_9NEOP2.540e-1255.36Hypothetical protein n=1 Tax=Timema monikensis Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.60.21.50coord: 1..60
e-value: 1.4E-20
score: 75.5
IPR024826DNA polymerase delta/II small subunit familyPANTHERPTHR10416DNA POLYMERASE DELTA SUBUNIT 2coord: 1..56

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig20104contigL-elsbetiae_contig20104:71..915 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig20104.6045.1mRNA_L-elsbetiae_contig20104.6045.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig20104 71..915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig20104.6045.1 ID=prot_L-elsbetiae_contig20104.6045.1|Name=mRNA_L-elsbetiae_contig20104.6045.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=60bp
KECPDVFFAGNQPQFATSLLEGASGQKQARMVCVPAFASTGQAALLDLQT
LDCTPLRFSS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR024826DNA_pol_delta/II_ssu