prot_L-elsbetiae_contig2009.6033.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig2009.6033.1
Unique Nameprot_L-elsbetiae_contig2009.6033.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length274
Homology
BLAST of mRNA_L-elsbetiae_contig2009.6033.1 vs. uniprot
Match: D8LCB1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB1_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 4.040e-19
Identity = 74/222 (33.33%), Postives = 118/222 (53.15%), Query Frame = 0
Query:    4 EDELWLSLV-VLGVLQVPVFISVPVLSTRMWIYTNDRRVLQKSPEVLMLSLWWESSVGHCVTYTLVSIPPAGAVVLAIAGRGEAAVKVITFQVLVLAPSLSAAFLVLGKSLLKGIDESLQQQQQRKQQLQRMGVSREDGKEAGTQPQNRSSGDPLMLAARNKVKRVVMFAVAVPMQTACMLIFASMTRYGSEVPLLFYLTPMTFTPPIWNIFNVTIHRGRTQ 224
             + LW+S + +L   Q  + I   +L+ RMWIY ND R+ +++PE+L +S   E   G  V+ T++ + PA A VLA+A   +AA KV     L L        L  G +LL+ +++ L+   +R +        R +   AGT         PL+ AAR  +K  + F + V + TA ++I    T YG+  PL+F+  P  F+PP+W +FNV +H GR++
Sbjct:  121 SERLWMSTIFMLSAGQTMMTIG-GILTVRMWIYCNDPRLTRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAVAKSLQAAGKVSAVAFLGLIVFCDFIILKSGTALLRTVNKYLRNTVERSE--------RSNSIVAGT-----VGSLPLLKAARKNIKFALYFCLVVSLLTAFLMI-CLFTTYGATAPLIFFGIPYGFSPPVWFVFNVQLHAGRSR 327          
BLAST of mRNA_L-elsbetiae_contig2009.6033.1 vs. uniprot
Match: A0A6H5KM92_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM92_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 7.900e-11
Identity = 68/257 (26.46%), Postives = 116/257 (45.14%), Query Frame = 0
Query:    4 EDELWLSLVVL-GVLQVPVFISVPVLSTRMWIY------------------------------TNDRRVLQKSPEVLMLSLWWESSVGHCVTYTLVSIPPAGAVVLAIAGRGEAAVKVITFQVLVLAPSLSAAFLVLGKSLLKGIDESLQQQQQRKQQLQRMGVSREDGKEAGTQPQNRSSGDPLMLAARNKVKRVVMFAVAVPMQTACMLIFASMTRYGSEVPLLFYLTPMTFTPPIWNIFNVTIHRGRTQLSAGP 229
             + LW+S + + G+ Q+ + I   +L+ RMW+Y                              +ND R+++++PE+LM+S   E   G  V+ T++ + PA A VLA A   +AA  V     L L        L    +LL+ +++ L+    R +        + +   AGT          L+ AAR  +K  + F V V + T  +++    T YG+  PL+F   P   +PP+W +FN+ +H GR++    P
Sbjct:  121 SERLWMSTIFMFGIGQIMMTIG-GILTVRMWLYCLTSDEQRSPLQLNRFPYVSPLRNHILFLASNDPRLIRETPELLMISEALERPTGLFVSNTVMCVGPAVATVLAAAKSLQAACMVSAVAFLGLIVFCDFIILKTATALLQTVNKYLRNSVVRSE--------KSNSIMAGT-----VGSLQLLKAARKNIKFALYFCVVVSLLTFSIVMIGLFTTYGATAPLIFSGIPYGCSPPVWFVFNIQLHAGRSRNRTEP 363          
BLAST of mRNA_L-elsbetiae_contig2009.6033.1 vs. uniprot
Match: D7G622_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G622_ECTSI)

HSP 1 Score: 70.1 bits (170), Expect = 4.640e-10
Identity = 46/121 (38.02%), Postives = 69/121 (57.02%), Query Frame = 0
Query:    8 WLSLVVLGVLQVPVFISV-PVLSTRMWIYTNDRRVLQKSPEVLMLSLWWESSVGHCVTYTLVSIPPAGAVVLAIAGRGEAAVKVITFQVLVLAPSLSAAFLVLGKSLLKGIDESLQQQQQR 127
            W  + VL V+   + +SV   L+ RMWIYTND R++Q S  +L +S   E   G  ++Y ++S  P  A VLA+ GR EAA K++    ++L       F + G++LL+ ID SLQ  + R
Sbjct:   26 WHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQASSTMLRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFTDTTFWIFGRALLRAIDASLQNSRMR 146          
BLAST of mRNA_L-elsbetiae_contig2009.6033.1 vs. uniprot
Match: A0A6H5LCQ2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ2_9PHAE)

HSP 1 Score: 70.1 bits (170), Expect = 5.030e-10
Identity = 46/121 (38.02%), Postives = 71/121 (58.68%), Query Frame = 0
Query:    8 WLSLVVLGVLQVPVFISVPVLST-RMWIYTNDRRVLQKSPEVLMLSLWWESSVGHCVTYTLVSIPPAGAVVLAIAGRGEAAVKVITFQVLVLAPSLSAAFLVLGKSLLKGIDESLQQQQQR 127
            W  + VL ++   + +SV   ST RMWIYTND R++Q S  +L +S   E   G  ++Y ++S  P  A VLA+ GR EAA K++    ++L      +F + G++LL+ ID SLQ  ++R
Sbjct:   26 WHEISVLVMILNQITVSVCGFSTVRMWIYTNDTRLMQGSITILRISAALEKKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVVADTSFWIFGRALLRAIDASLQNSRKR 146          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig2009.6033.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LCB1_ECTSI4.040e-1933.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KM92_9PHAE7.900e-1126.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G622_ECTSI4.640e-1038.02Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LCQ2_9PHAE5.030e-1038.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 114..134
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..28
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 215..273
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 110..167
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 71..89
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 197..214
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..70
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 192..196
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 29..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..191
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 90..109
NoneNo IPR availableTMHMMTMhelixcoord: 197..216
NoneNo IPR availableTMHMMTMhelixcoord: 168..187
NoneNo IPR availableTMHMMTMhelixcoord: 7..29
NoneNo IPR availableTMHMMTMhelixcoord: 59..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig2009contigL-elsbetiae_contig2009:3972..5016 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig2009.6033.1mRNA_L-elsbetiae_contig2009.6033.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig2009 3876..6666 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig2009.6033.1 ID=prot_L-elsbetiae_contig2009.6033.1|Name=mRNA_L-elsbetiae_contig2009.6033.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=274bp
MVVEDELWLSLVVLGVLQVPVFISVPVLSTRMWIYTNDRRVLQKSPEVLM
LSLWWESSVGHCVTYTLVSIPPAGAVVLAIAGRGEAAVKVITFQVLVLAP
SLSAAFLVLGKSLLKGIDESLQQQQQRKQQLQRMGVSREDGKEAGTQPQN
RSSGDPLMLAARNKVKRVVMFAVAVPMQTACMLIFASMTRYGSEVPLLFY
LTPMTFTPPIWNIFNVTIHRGRTQLSAGPLPYADVSNYSSFTRPRGSWLS
ISSIRRSRSRPQVVAIETSTVVP*
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