prot_L-elsbetiae_contig1999.5988.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1999.5988.1
Unique Nameprot_L-elsbetiae_contig1999.5988.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length92
Homology
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BLAST of mRNA_L-elsbetiae_contig1999.5988.1 vs. uniprot
Match: A0A7S3UVD8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVD8_HETAK)

HSP 1 Score: 60.8 bits (146), Expect = 5.320e-10
Identity = 33/76 (43.42%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:    8 PSWKYPNSDRAFGEPPLFSCTNSYKRVLEAHLVEAVAKITRSYEAMEEGTLRLSNLKADVGAELWLMQSSLDEVRK 83
            PSWK P++     EPPL +CT SY+ +L  HL  +VA++   Y      T RLSNLKA +GA+L    +S++E R+
Sbjct:   24 PSWKVPDTLAKHSEPPLGTCTPSYQELLCRHLERSVAELRAEYSHRPATTQRLSNLKAQLGADL----ASMEERRR 95
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1999.5988.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S3UVD8_HETAK5.320e-1043.42Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1999contigL-elsbetiae_contig1999:2276..3869 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1999.5988.1mRNA_L-elsbetiae_contig1999.5988.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1999 2274..3869 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1999.5988.1 ID=prot_L-elsbetiae_contig1999.5988.1|Name=mRNA_L-elsbetiae_contig1999.5988.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=92bp
KEDAAKHPSWKYPNSDRAFGEPPLFSCTNSYKRVLEAHLVEAVAKITRSY
EAMEEGTLRLSNLKADVGAELWLMQSSLDEVRKGLRAANEAE
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