prot_L-elsbetiae_contig199.5957.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig199.5957.1
Unique Nameprot_L-elsbetiae_contig199.5957.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length683
Homology
BLAST of mRNA_L-elsbetiae_contig199.5957.1 vs. uniprot
Match: A0A6H5JUL1_9PHAE (Zn(2)-C6 fungal-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JUL1_9PHAE)

HSP 1 Score: 814 bits (2103), Expect = 3.320e-285
Identity = 470/706 (66.57%), Postives = 531/706 (75.21%), Query Frame = 0
Query:    1 MLEVLSPAVSVSSMGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGADDEATVRYLGLMRTALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGPEGKLLRDRSEQDLSLDLVFQIYDQPDGCVSGFNRSAAVGDWRRN------SSSXXXXXXXXXXXXXGEPSSAVDQMIAQAMAPPSDSQSSPLKALKYLSTACGLSSEVFDPTNKCVTVKQYLGEMDSALKGAHSLFVATDLGECVTGVMMVKIWGGVTVVMRSWGKLEDRNIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAVTLAHFGRTDIYMRLRATFNKHTFPGTEMPEISSYTPGSVCPQPGGSCSKLAYWLQVRGTMCGEPEWKPHFTKGRLSEASENAAYAAALDRGNSCPD--KANGAV----SQVLASSPNFSPPSESAMAMNGADLVNG-SPVREALDAGLHEIGAHFDDLSGLEDL--AGADLXXXXXXXPLGMGVEFDLSQLIQEPENAGNAGSAGANTHCAGAGVGVKAETDALCLEACQAGGAAEIAAAVGKGM-----------GMGGAAPMNTMQIPLGLVAGRGGXXXXXXXXXXXXXXXXAVTGGGELSRGPSFGISGPAAMGWGTGAAPAVTSSSGDVMSRQSSIDINTIMQMANSDELLKKIDGGTPDAIDNALAFGEGPAKEIFGVELS 680
            MLEVLSPAVS  S GLATANPIKQPE+RRQA+LAVFWGVVAMGSRILGA DE+TVRYLGLMR+ALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNA+GPEGKLLRDRSEQD+SLDLVFQ+YDQPDG VSGFNRS AVGDWRRN      S +             G+P+SAVDQMIAQA++PPS+ QSSPLKALKYLST CGLSSEVFDPTNKCVTVKQYL EMDSALKGAHSLFVATDL EC+TGV++VKI+GGVT++MRSWG+LEDR+IGLAQVEEGVGYALTRPGLFTFPMWWHALHCAA+ LAHFGR D YMRLRATFNK TFPGTEMP I  Y+P SVCPQ GG+CSKLAYWLQVRGTMC + EWKP F++ RLS+ASENAAYAAAL+R  SC    K +GA         A +P    P+     ++ +D+V G S +R AL+AGL EIG  F+DL GL+ L  +GADLXXXXXXX      EFDLSQL + PE    A                   + A+        GA ++ AA G G            G GGAA +N+MQIP GLVAGR G                 + GGGE+SRGPSFGISGPAA+    G A A   SSG  +SRQSS+DINTIMQM  SDE L+K +GGTPDAID+AL +GEGPAKE+FG++L+
Sbjct:  242 MLEVLSPAVS--SRGLATANPIKQPETRRQARLAVFWGVVAMGSRILGAADESTVRYLGLMRSALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAIGPEGKLLRDRSEQDVSLDLVFQMYDQPDGAVSGFNRSGAVGDWRRNQNATKGSPTSPEQTHSGGGSDSGKPTSAVDQMIAQAVSPPSECQSSPLKALKYLSTVCGLSSEVFDPTNKCVTVKQYLAEMDSALKGAHSLFVATDLSECITGVVIVKIFGGVTMLMRSWGQLEDRDIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAICLAHFGRNDTYMRLRATFNKTTFPGTEMPSIEDYSPASVCPQLGGNCSKLAYWLQVRGTMCADLEWKPQFSRSRLSDASENAAYAAALERRYSCGKHKKRSGAAWCGERWGAAEAPKHPVPNPVDQ-VSASDIVEGGSQLRAALNAGLAEIGTPFNDLGGLDILEGSGADLXXXXXXXS-----EFDLSQL-ESPEQVVEASGEAEXXXXXXXXXXXXTGSPAV--------GATDVPAA-GSGXXXXXXXXPGXPGAGGAAAVNSMQIPAGLVAGRSGSSDVAGSRGAGAGAP-VIIGGGEISRGPSFGISGPAAVSSIFGPAGA---SSGGALSRQSSLDINTIMQMVTSDEQLRKNEGGTPDAIDHALEYGEGPAKEMFGIDLA 925          
BLAST of mRNA_L-elsbetiae_contig199.5957.1 vs. uniprot
Match: A0A836CBP3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBP3_9STRA)

HSP 1 Score: 177 bits (450), Expect = 2.120e-43
Identity = 120/379 (31.66%), Postives = 178/379 (46.97%), Query Frame = 0
Query:   16 LATANPIKQPESRRQAKLAVFWGVVAMGSRILGADDEATVRYLGLMRTALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGPEGKLLRDRSEQDLS-LDLVFQIY----------DQPDGCVSGFNRSAAVGDWRRNSSSXXXXXXXXXXXXXGEPSSAVDQMIAQAMAPPSDSQSSPLKALKYLSTACGLSSEVFDPTNKCVTVKQYLGEMDSALKGAHSLF-VATDLGECVTGVMMVKIWGGVTVVMRSWGKLEDRNI------------GLAQVEEGVGYALTRPGLFTFPMWWHALHCAAVTLAHFGRTDIYMRLRATFNKHTFPGTEMPEISSYTPGSVCPQPGGSCSKLAYWLQVR 370
            L  AN       RR AKLAVFWGVVA+GSRILGA      RY   +  ALR+CFD +D  VVQAYLLL ++ETM GN    +RY+  A T+H         K ++++ +  L  L+ + Q++          D+     SG N + A                           +A  +M+       +     P+ AL+       ++ +V DP + C  V  +L  +++A  G   +   ++ L +CV  V    IW G+T+ M   G+++                GL +V  G+  A++RPGL TFP+WWH +HCAA+TL H G    Y R +A F+ H +PGT++P   ++    VC      C +   WL  R
Sbjct:  329 LVPANAAPAASKRRSAKLAVFWGVVALGSRILGAPRADVERYRAQVTAALRDCFDEDDPMVVQAYLLLGSLETMLGNCPKARRYMHFAKTVH----ASLRAKSVQEQHQAQLEGLETLLQVFGARMCECDAVDEGPCTASGANTAVAA--------------------------AACSEMLQSIFMARTGQAVKPMDALRLTLGMPNITRKVLDPESPCPIVLAHLHHLENACDGVGVIINTSSVLTDCVAIVAPQMIWHGITLSMS--GRIQXXXXXXXXXXXXXXXAGLKEVAAGMELAMSRPGLMTFPLWWHCMHCAAITLQHHGLRADYDRFKAVFDNHCYPGTQLPPFDAFNLDHVCGA-DNLCRQYQAWLLRR 674          
BLAST of mRNA_L-elsbetiae_contig199.5957.1 vs. uniprot
Match: A0A835YR83_9STRA (Zn(2)-C6 fungal-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR83_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.440e-33
Identity = 102/317 (32.18%), Postives = 155/317 (48.90%), Query Frame = 0
Query:   64 ALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNGNAMGPEGKLLRDRS--EQDLSL-DLVFQIY-----DQPDGCVSGFNRSAAVGDWRRNSSSXXXXXXXXXXXXXGEPSSAVDQMIAQAMAPPSDSQSSPLKALKYLSTACGLSSEVFDPTNKCVTVKQYLGEMDSALKGAHSLFVATDLGECVTGVMMVKIWGGVTVVMRSWGKLEDRNIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAVTLAHFGRTDIYMRLRATFNKHTFPGTEMPEISSYTP--GSVCPQPGGSCSKLAYWLQVR 370
            AL  CFD  D +VV+AYLLL T+ +M GN +  KRY   + T+H G A    G++  D S  E + +L   + Q Y     D PD      +    +                            V QM   A         SP+ AL+ +    G +S+  D  + C  V+  L  ++ A  G  ++   + L +CV       ++ G+T+VM+  G+L    +G+  +E G+  A+TRPGL TF +WWH LHCAA+T+AH  R D Y+RL+  +++HT PGT++P ++ Y    GSVC  P   C +  +WL+ R
Sbjct:  825 ALGACFDEPDVQVVRAYLLLGTLHSMLGNASKAKRYAHFSQTLHAGLA----GQMREDSSWLESECALLQTLIQAYGPRLLDSPDAMRKPPDNPEGID---------------------------VPQMSLMAQR---GHVRSPINALRIMIGLQGFASKALDHRSTCAEVRHSLLLLEHAWDGVLAVITNSGLQDCVAVTAPQCLYHGITLVMQ--GRLA---MGVEHIERGINLAITRPGLVTFTIWWHCLHCAAITMAHLNRVDTYLRLKDVYDRHTHPGTQLPSLADYHADCGSVC-GPDQYCQQFRHWLERR 1101          
BLAST of mRNA_L-elsbetiae_contig199.5957.1 vs. uniprot
Match: A0A835Z4T4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4T4_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.030e-19
Identity = 95/377 (25.20%), Postives = 146/377 (38.73%), Query Frame = 0
Query:   31 AKLAVFWGVVAMGSRILGADDEATVRYLGLMRTALRECFDCNDKE---------------------------------------VVQAYLLLSTVETMRGNEAAGKRYLDHAHTMHNG-NAMGPEGKLLRDRSEQDLSLDLVFQIYDQPDGCVSGFNRSAAVGDWRRNSSSXXXXXXXXXXXXXGEPSSAVDQMIAQAMAPPSDSQSSPLKALKYLSTACGLSSEVFDPTNKCVTVKQYLGEMDSALKGAHSLFVATDLGECVTGVMMVKIWGGVTVVMRSWGKLEDRNIGLAQVEEGVGYALTRPGLFTFPMWWHALHCAAVTLAHFGRTDIYMRLRATFNKHTFPGTEMPEISSYTPG--SVCPQPGGSCSKLAY 365
            A  AVFW  V +GS + GA    T RY      ALR CFD  D                                         VV AYL L  +E M G+ A  +RY+  + T++ G  A G  G    D +E  +   L+     +    +   + S  V      S                 P  A+  M+                                +P +    V+Q +  +  A   A  +   T L  C+       +  G T++M+   ++E+   GLA +E+G+  A+ +P L  F +WWHA+HC  + LAH GR   Y+R +A ++ +TFPGT++P++ +Y     S+C  PG  C  +AY
Sbjct:   29 ASAAVFWSTVGLGSFLCGAARAVTERYAAFAARALRACFDEPDTXXXXXXXXXXXXXXXXXXXXXKLAGAXXXXXXXXXXXXXXVVHAYLQLGLLEGMLGHYAKARRYVHFSQTLYAGLQAQGQPGSAW-DSNEGGMLSSLIASFGPR----ILDTSESEQVPPDNPESLDVPGMALAAKRGKVSRPFDALRIMLGVXX-----------XXXXXXXXXXXXXXXALEPASPTHVVQQNVQHLVDAWDAAGVIMTCTTLSGCIAARAPQLLLRGSTLLMQE--RVEE---GLADIEQGLALAVQQPNLIRFSLWWHAIHCGVIGLAHHGRIGAYVRTKAVYDAYTFPGTQLPDMPTYLADDHSIC-GPGHYC--IAY 381          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig199.5957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JUL1_9PHAE3.320e-28566.57Zn(2)-C6 fungal-type domain-containing protein n=2... [more]
A0A836CBP3_9STRA2.120e-4331.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YR83_9STRA2.440e-3332.18Zn(2)-C6 fungal-type domain-containing protein n=1... [more]
A0A835Z4T4_9STRA1.030e-1925.20Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..682
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig199contigL-elsbetiae_contig199:3734..9820 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig199.5957.1mRNA_L-elsbetiae_contig199.5957.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig199 2224..11086 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig199.5957.1 ID=prot_L-elsbetiae_contig199.5957.1|Name=mRNA_L-elsbetiae_contig199.5957.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=683bp
MLEVLSPAVSVSSMGLATANPIKQPESRRQAKLAVFWGVVAMGSRILGAD
DEATVRYLGLMRTALRECFDCNDKEVVQAYLLLSTVETMRGNEAAGKRYL
DHAHTMHNGNAMGPEGKLLRDRSEQDLSLDLVFQIYDQPDGCVSGFNRSA
AVGDWRRNSSSSLSSSSSSCSSAAGEPSSAVDQMIAQAMAPPSDSQSSPL
KALKYLSTACGLSSEVFDPTNKCVTVKQYLGEMDSALKGAHSLFVATDLG
ECVTGVMMVKIWGGVTVVMRSWGKLEDRNIGLAQVEEGVGYALTRPGLFT
FPMWWHALHCAAVTLAHFGRTDIYMRLRATFNKHTFPGTEMPEISSYTPG
SVCPQPGGSCSKLAYWLQVRGTMCGEPEWKPHFTKGRLSEASENAAYAAA
LDRGNSCPDKANGAVSQVLASSPNFSPPSESAMAMNGADLVNGSPVREAL
DAGLHEIGAHFDDLSGLEDLAGADLDLDLNLNPLGMGVEFDLSQLIQEPE
NAGNAGSAGANTHCAGAGVGVKAETDALCLEACQAGGAAEIAAAVGKGMG
MGGAAPMNTMQIPLGLVAGRGGSSGGGGGVDGGGGAAPAVTGGGELSRGP
SFGISGPAAMGWGTGAAPAVTSSSGDVMSRQSSIDINTIMQMANSDELLK
KIDGGTPDAIDNALAFGEGPAKEIFGVELSKP*
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