prot_L-elsbetiae_contig19619.5849.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19619.5849.1
Unique Nameprot_L-elsbetiae_contig19619.5849.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
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BLAST of mRNA_L-elsbetiae_contig19619.5849.1 vs. uniprot
Match: D8LSN9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSN9_ECTSI)

HSP 1 Score: 102 bits (254), Expect = 2.000e-24
Identity = 56/80 (70.00%), Postives = 61/80 (76.25%), Query Frame = 0 
Query:    3 GLVLLRGLRPSVWEGEDMGTVLRIGASACAGAGKTLVVTTQVXXXXXXXXXXACEEGSKPP-VALLIEPMPELWEAGLLY 81
            GLV L G+RPSVWE  DMGTVLRI +SACAGAGKTLVVTT V          A E+G+ PP +ALLIEPMPELWEAGLLY
Sbjct:  240 GLVFLPGVRPSVWESGDMGTVLRIASSACAGAGKTLVVTTTVLGVGGTG---AAEDGTTPPPMALLIEPMPELWEAGLLY 316
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19619.5849.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSN9_ECTSI2.000e-2470.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19619contigL-elsbetiae_contig19619:79..387 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19619.5849.1mRNA_L-elsbetiae_contig19619.5849.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19619 79..387 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19619.5849.1 ID=prot_L-elsbetiae_contig19619.5849.1|Name=mRNA_L-elsbetiae_contig19619.5849.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
GGGLVLLRGLRPSVWEGEDMGTVLRIGASACAGAGKTLVVTTQVLGGGGG
AASGACEEGSKPPVALLIEPMPELWEAGLLYCR*
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