prot_L-elsbetiae_contig19412.5760.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19412.5760.1
Unique Nameprot_L-elsbetiae_contig19412.5760.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length110
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig19412.5760.1 vs. uniprot
Match: A0A6H5KNG5_9PHAE (BEACH domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNG5_9PHAE)

HSP 1 Score: 62.0 bits (149), Expect = 7.100e-9
Identity = 37/78 (47.44%), Postives = 43/78 (55.13%), Query Frame = 0 
Query:    1 EACASIEEDRRALAFAHDVELRLNPWYGRPRTRV---VNESDFALPASSENAGI------------YLTSATWRGGFG 63
            EA A +EEDRRA AFA DV LRL PWYGRPRTR     + +D A  AS   AG+               +A  RGG+G
Sbjct:  757 EARAKVEEDRRAFAFARDVGLRLEPWYGRPRTRSGSGPSVADSAAAASGGTAGVTAPAGEDIATPTMTAAAARRGGYG 834
[Close]
BLAST of mRNA_L-elsbetiae_contig19412.5760.1 vs. uniprot
Match: D8LHG8_ECTSI (BEACH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHG8_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 9.680e-9
Identity = 27/33 (81.82%), Postives = 28/33 (84.85%), Query Frame = 0 
Query:    1 EACASIEEDRRALAFAHDVELRLNPWYGRPRTR 33
            EA A +EEDRRA AFAHDV LRL PWYGRPRTR
Sbjct:  767 EARAKVEEDRRAFAFAHDVGLRLEPWYGRPRTR 799
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19412.5760.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KNG5_9PHAE7.100e-947.44BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
D8LHG8_ECTSI9.680e-981.82BEACH domain-containing protein n=1 Tax=Ectocarpus... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19412contigL-elsbetiae_contig19412:103..604 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19412.5760.1mRNA_L-elsbetiae_contig19412.5760.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19412 103..604 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19412.5760.1 ID=prot_L-elsbetiae_contig19412.5760.1|Name=mRNA_L-elsbetiae_contig19412.5760.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=110bp
EACASIEEDRRALAFAHDVELRLNPWYGRPRTRVVNESDFALPASSENAG
IYLTSATWRGGFGDNGCAERPGDGISGQDGDGDSENRQRHRERGVSLATK
KKDDLLACG*
back to top