prot_L-elsbetiae_contig19371.5740.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19371.5740.1
Unique Nameprot_L-elsbetiae_contig19371.5740.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length85
Homology
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BLAST of mRNA_L-elsbetiae_contig19371.5740.1 vs. uniprot
Match: D7FK36_ECTSI (Protein kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK36_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.750e-17
Identity = 50/83 (60.24%), Postives = 62/83 (74.70%), Query Frame = 0 
Query:    4 RGDEQHHGSEEQSSRRFSRSYRLGKKMGEGEFANTYGATKRGEKRGERSSCIVKRA-RRGSSKDGEHALAEEARILRLLTHRS 85
            RG EQ+ G E+  S  FSR Y LGKK+GEG FA T+GA +RG+++G + SCIVKRA +RG+S +  H L EEARILRLLTH S
Sbjct:  498 RGTEQNRG-EQPGSSEFSRLYALGKKLGEGAFAETFGAIRRGQRKGSQGSCIVKRAVQRGASHEVMHGLVEEARILRLLTHPS 579
[Close]
BLAST of mRNA_L-elsbetiae_contig19371.5740.1 vs. uniprot
Match: D8LK21_ECTSI (Possible Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK21_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 1.640e-11
Identity = 38/81 (46.91%), Postives = 52/81 (64.20%), Query Frame = 0 
Query:    3 VRGDEQHHGSEEQSSRRFSRSYRLGKKMGEGEFANTYGATKRGEKRGERSSCIVKRARRGSSKDGEHALAEEARILRLLTH 83
            + G +  H   E  S+RFSRS+ LGKK+GEG FA  + AT +G++ G +S  + +  RRG +K+ E  L EE RILRLL H
Sbjct:   59 LSGGDGKHSFREFHSKRFSRSFNLGKKLGEGAFAEVFEATVKGDRPGGKSYAVKRTVRRGLAKEDEKGLLEEVRILRLLQH 139
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19371.5740.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FK36_ECTSI2.750e-1760.24Protein kinase domain-containing protein n=2 Tax=E... [more]
D8LK21_ECTSI1.640e-1146.91Possible Ca2+/calmodulin-dependent protein kinase,... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.20coord: 1..85
e-value: 1.0E-7
score: 33.8
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainPFAMPF07714Pkinase_Tyrcoord: 25..84
e-value: 5.6E-6
score: 25.8
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 18..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19371contigL-elsbetiae_contig19371:461..1130 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19371.5740.1mRNA_L-elsbetiae_contig19371.5740.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19371 461..1130 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19371.5740.1 ID=prot_L-elsbetiae_contig19371.5740.1|Name=mRNA_L-elsbetiae_contig19371.5740.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=85bp
QKVRGDEQHHGSEEQSSRRFSRSYRLGKKMGEGEFANTYGATKRGEKRGE
RSSCIVKRARRGSSKDGEHALAEEARILRLLTHRS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR011009Kinase-like_dom_sf