prot_L-elsbetiae_contig1934.5728.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1934.5728.1
Unique Nameprot_L-elsbetiae_contig1934.5728.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length359
Homology
BLAST of mRNA_L-elsbetiae_contig1934.5728.1 vs. uniprot
Match: D7FKK4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKK4_ECTSI)

HSP 1 Score: 336 bits (862), Expect = 5.940e-111
Identity = 205/367 (55.86%), Postives = 248/367 (67.57%), Query Frame = 0
Query:    1 MVETDL-QAALLVVGLIFLVVVCALFQRRPRPDAFSHEELGQIRIDRELAKEAMLEEKAQRLKGRARVHRHNRMVLTARKDSGRLLQGAQERWDARGRSIYGDAWDDPQDGNLPLRTLFNLPRGEIDSIREEASRLLQASPASDFSSLPFPPGRLQKFDSSGAQGFSDVGGVGKDEHRAMTASARRGPAY-TSRQLSGAPFVDTRFVNVPTP--IVPPLDLTRLNDASNAHNLQPFPRPS--STTVAPGRKLFHDTSASPSEINPMQINSAAPLREEHDRSTDPAATTTTARGDTNLDLKDFTKQTAPASVSWFQDPGLIHPKPPDIPVSRSKRDDH----GNESLSARLARLAAGGSSRRVVPIEF 357
            MVE+ L QA ++VVGL  LV+VC LFQ RPRP+AFS E+LGQIRI+RE+AKEA+LEEKAQRLK RAR+HRHNR+VLTARK +GRLL GAQERWDARGRSIYGDAWDDP DGN+PLRTLFNLP+ EIDSIREEASRLL++ PASDFSSLP PPG+ ++     A          +D+HRAMTA ARRGPAY   R  + APFVD+RFV++ T   +VPPLD  RLN+  +      FP     S   A G ++  D   +  + NP   NS   +R +        A    A G T  D ++      PA +S FQ PGL HP+PP +P  R+K +      G ESLSARLARLAAG +  RVVP+E 
Sbjct:    1 MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQIRINREMAKEALLEEKAQRLKERARIHRHNRLVLTARKGAGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIDSIREEASRLLESEPASDFSSLPTPPGQQRRVRDGSASSVRRTTDSDQDDHRAMTAPARRGPAYGNGRSPTAAPFVDSRFVHLSTSPAVVPPLDFARLNNDPSK-----FPPGDVWSYPAAKGGEMLRDRLPT-QDRNP---NSRQRMRVQ--------ARNGPASGHTTRDDQEL--HGGPAVISSFQAPGLTHPEPPAVPFLRAKPETESKELGRESLSARLARLAAGRTPGRVVPVEL 348          
BLAST of mRNA_L-elsbetiae_contig1934.5728.1 vs. uniprot
Match: A0A6H5JIG2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIG2_9PHAE)

HSP 1 Score: 232 bits (592), Expect = 1.200e-72
Identity = 121/158 (76.58%), Postives = 140/158 (88.61%), Query Frame = 0
Query:    1 MVETDL-QAALLVVGLIFLVVVCALFQRRPRPDAFSHEELGQIRIDRELAKEAMLEEKAQRLKGRARVHRHNRMVLTARKDSGRLLQGAQERWDARGRSIYGDAWDDPQDGNLPLRTLFNLPRGEIDSIREEASRLLQAS-PASDFSSLPFPPGRLQK 156
            MVE+ L QA ++VVGL  LV+VC LFQ RPRP+AFS E+LGQ+RIDRE+AKEA+LEEKAQRLK RAR+HRHNR+VLTARK +GRLL GAQERWDARGRSIYGDAWDDP DGN+PLRTLFNLP+ EIDSIREEASRLL++  PASDF SLP PPG+ ++
Sbjct:    1 MVESGLMQAVVIVVGLTVLVMVCILFQGRPRPNAFSPEQLGQLRIDREMAKEALLEEKAQRLKERARIHRHNRLVLTARKGAGRLLHGAQERWDARGRSIYGDAWDDPHDGNVPLRTLFNLPKEEIDSIREEASRLLESEWPASDFLSLPTPPGQQRR 158          
BLAST of mRNA_L-elsbetiae_contig1934.5728.1 vs. uniprot
Match: A0A835ZJ30_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ30_9STRA)

HSP 1 Score: 120 bits (300), Expect = 1.100e-27
Identity = 84/219 (38.36%), Postives = 124/219 (56.62%), Query Frame = 0
Query:    3 ETDLQAALLVVGLIFLVVVCALFQ--RRPRPDAFSHEELGQIRIDRELAKEAMLEEKAQRLKGRARVHRHNRMVLTARKDSGRLL--QGAQERWDARGRSIYGDAWDDPQDGNLPLRTLFNLPRGEIDSIREEASRLLQASPASDFS----SLPFP----PGRLQKFDSSGAQGFSDVGGVGKDEHRA----MTASARRGPAYTSRQLSGAPFVDTRFV 205
            E  +QAAL+VV +I  +V+C+L+   R  RP  F+  EL +IR+ +E  +EA L+EK Q ++ R ++H  NRM+LTAR  + R++  +G  + WD +GR++YG AWD+P DGNLPLR LFNLP  EI + + +A++L++       +    + P P    P     + S        V    + +H A    MTA A R  A  SR    AP+ D RFV
Sbjct:    2 EQGIQAALIVVAVILFLVICSLYTLFRPRRPRMFTPLELDEIRLRKEEEREAALDEKIQAMQQRKKMHSTNRMMLTARTKTARVVDEEGGAD-WDEKGRAVYGSAWDEPNDGNLPLRELFNLPDEEIRAAKAQAAQLVEMQTYRQLTVRHTAQPPPTTAAPSPRPHYTSPRPTPPLPVTSSAQQQHPAAEPLMTARANR--AAQSRPAYEAPYDDPRFV 217          
BLAST of mRNA_L-elsbetiae_contig1934.5728.1 vs. uniprot
Match: A0A7S3ZP92_9STRA (Hypothetical protein (Fragment) n=3 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZP92_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 8.740e-12
Identity = 42/120 (35.00%), Postives = 67/120 (55.83%), Query Frame = 0
Query:   13 VGLIFLVVVCALFQRRPRPDAFSHEELGQIRIDRELAKEAMLEEKAQRLKGRARVHRHNRMVLTARKDSGRLLQGAQERWDARGRSIYGDAWDDPQDGNLPLRTLFNLPRGEIDSIREEA 132
            VGL+F +V C       R   FS ++L ++R  R+   E  +E + +++K + +  +  R +   R    RLL  A+ R DARGR +YGD WD+P +  +P+R LF L  GE+  ++ EA
Sbjct:   56 VGLVFCIVSCFKVFGHRRRRKFSKKQLDRLRDWRDGRAETKVESQIRKMKDKLKTMKQRRRLERGRDAHERLLDEAEARRDARGREVYGDEWDNPDNDGVPIRDLFALSDGEVRQLQLEA 175          
BLAST of mRNA_L-elsbetiae_contig1934.5728.1 vs. uniprot
Match: A0A7S4DFT0_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFT0_HETAK)

HSP 1 Score: 54.3 bits (129), Expect = 1.020e-5
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 0
Query:   84 LLQGAQERWDARGRSIYGDAWDDPQDGNLPLRTLFNLPRGEI 125
            +++    ++DA+GR +YGDAWD P DGN PLR L  LP  E+
Sbjct:   69 MVEDGISQYDAKGREVYGDAWDTPVDGNAPLRELLALPEDEL 110          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1934.5728.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FKK4_ECTSI5.940e-11155.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JIG2_9PHAE1.200e-7276.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZJ30_9STRA1.100e-2738.36Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3ZP92_9STRA8.740e-1235.00Hypothetical protein (Fragment) n=3 Tax=Pelagomona... [more]
A0A7S4DFT0_HETAK1.020e-550.00Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..25
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 26..358
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1934contigL-elsbetiae_contig1934:2623..4959 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1934.5728.1mRNA_L-elsbetiae_contig1934.5728.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1934 2623..4983 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1934.5728.1 ID=prot_L-elsbetiae_contig1934.5728.1|Name=mRNA_L-elsbetiae_contig1934.5728.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=359bp
MVETDLQAALLVVGLIFLVVVCALFQRRPRPDAFSHEELGQIRIDRELAK
EAMLEEKAQRLKGRARVHRHNRMVLTARKDSGRLLQGAQERWDARGRSIY
GDAWDDPQDGNLPLRTLFNLPRGEIDSIREEASRLLQASPASDFSSLPFP
PGRLQKFDSSGAQGFSDVGGVGKDEHRAMTASARRGPAYTSRQLSGAPFV
DTRFVNVPTPIVPPLDLTRLNDASNAHNLQPFPRPSSTTVAPGRKLFHDT
SASPSEINPMQINSAAPLREEHDRSTDPAATTTTARGDTNLDLKDFTKQT
APASVSWFQDPGLIHPKPPDIPVSRSKRDDHGNESLSARLARLAAGGSSR
RVVPIEFA*
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