prot_L-elsbetiae_contig19310.5720.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19310.5720.1
Unique Nameprot_L-elsbetiae_contig19310.5720.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length93
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19310.5720.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006553Leucine-rich repeat, cysteine-containing subtypeSMARTSM00367LRR_CC_2coord: 6..31
e-value: 0.0029
score: 26.8
coord: 32..57
e-value: 1.0E-4
score: 31.7
coord: 58..83
e-value: 0.044
score: 22.9
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..93
e-value: 8.5E-25
score: 89.0
IPR001611Leucine-rich repeatPFAMPF13516LRR_6coord: 6..25
e-value: 0.08
score: 13.0
coord: 33..55
e-value: 0.021
score: 14.9
NoneNo IPR availablePANTHERPTHR13382:SF4coord: 45..92
coord: 4..54
NoneNo IPR availablePANTHERPTHR13382MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR Bcoord: 45..92
coord: 4..54
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 5..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19310contigL-elsbetiae_contig19310:1195..1976 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19310.5720.1mRNA_L-elsbetiae_contig19310.5720.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19310 1194..1976 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19310.5720.1 ID=prot_L-elsbetiae_contig19310.5720.1|Name=mRNA_L-elsbetiae_contig19310.5720.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=93bp
ALGECCPGLQRLDVKGCDGVTDVGLAWMSSGCPALEYLDVSGCVKVSNAG
VTSLCEKCPLLAHLGMASLKHVTDTGVARLGSGCTRLTHLDMS
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006553Leu-rich_rpt_Cys-con_subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt