prot_L-elsbetiae_contig19249.5695.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig19249.5695.1
Unique Nameprot_L-elsbetiae_contig19249.5695.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length444
Homology
BLAST of mRNA_L-elsbetiae_contig19249.5695.1 vs. uniprot
Match: A0A6H5K7X0_9PHAE (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7X0_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.280e-88
Identity = 254/502 (50.60%), Postives = 284/502 (56.57%), Query Frame = 0
Query:    2 ALVHTRQAYPPKSMPCTLLLASDPLPGGGMKAILHPLERGSRDSLTPADGDPASPAAAAXXXXXXXXXVEEEVGEDTGPLVGLSVVLDCRVACTVELLWDVDLTLLGKEMGLHPKLHLLPASTGGDSSSSRSNVINVIGGSGTSAGAAAPADRSNSSRHSLVGDLWASVVSASGALGRAGSGRWGGRIAAGAPPDSSA-PSARVRQGSGWREGGLAAIV----------GDEDEEMGRRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXP-------IGS----RSWAASLGLRKSSVLNGAHGGSGAEDDDENSAGVGSTVGQILGIGGRGRGASVPGAR-----MGLCGKRTVPRALSAGGSRVFETLPGESYFRGRPRSGAWSVGVAASGXXXXXXXXXX--------------------------------GRRRWPRVEDSVRAGRCSLAVVIRPAAGAETGDWAGWRHRPTHRVTRQV 444
            ALVHTRQAYPPK+MPC+LL+ASDP   GG+KAILHP  R S D++      P       XXXXXXXXX       + GPLVG+SVVLDCR+ACTVELLWDVDLTLLG+EMGLHPKL    A+    +SSS ++  +V GG G S            S  SL G+ WAS VSAS  L RAG  RWG R+A GAPP+SS+ PS                             + DEEMG R  G    XXXXXXXXXXXXXXXXXXXXXXXXX                        +GS    RSWAASLGLRKSSV N     +G ED  + +AGVG TVGQ LG+GG                MGLCGKRTVPRALSAG  RVF TLPGESYFRGR + G W+ G  A+                                           G R WPRV D VRAGRCSLA+VIRPAAG ETGDW GWRHRPTHRVTRQ+
Sbjct:   84 ALVHTRQAYPPKTMPCSLLVASDP---GGVKAILHP--RDSDDNIPVDPRPPXXXXXXXXXXXXXXXXGALGARAEAGPLVGVSVVLDCRIACTVELLWDVDLTLLGREMGLHPKLRT--AAGAAAASSSPTDRFDVGGGGGLS------------SLSSLPGNAWASAVSASRRLFRAGRERWGSRVA-GAPPESSSRPSXXXXXXXXXXXXXXXXXXXXXXXXXYPSNNVDEEMGGRGVGGALGXXXXXXXXXXXXXXXXXXXXXXXXXGASAAEAVLASLDGPGARRAGTGNVGSGGAGRSWAASLGLRKSSVFN-----AGGEDGSD-TAGVGWTVGQALGLGGXXXXXXXXXXXXXXGIMGLCGKRTVPRALSAGRGRVFTTLPGESYFRGRQQGGEWNAGATATSAAGAAKVGGGRGGGVDVRXXXXXXXXXXXXXXXXGAGERPAAGGRDWPRVGDPVRAGRCSLAIVIRPAAGEETGDWVGWRHRPTHRVTRQI 559          
BLAST of mRNA_L-elsbetiae_contig19249.5695.1 vs. uniprot
Match: D7FQX1_ECTSI (RING-type E3 ubiquitin transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQX1_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 2.140e-88
Identity = 255/528 (48.30%), Postives = 273/528 (51.70%), Query Frame = 0
Query:    2 ALVHTRQAYPPKSMPCTLLLASDPLPGGGMKAILHPLERGSRDSLTPADGDPASPAAAAXXXXXXXXXVEEEVGEDTGPLVGLSVVLDCRVACTVELLWDVDLTLLGKEMGLHPKLHLLPASTGGDSSSSRSNVINVIGGSGTSAGAAAPADR------------------------SNSSRHSLVGDLWASVVSASGALGRAGSGRWGGRIAAGAPPDSSA-------PSARVRQGSGWREGGLAAIVG----DEDEEMGRRRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPI------------GSRSWAASLGLRKSSVLNGAHGGSGAEDDDENSAGVGSTVGQILGIGGRGRGASV----PGARM-GLCGKRTVPRALSAGGSRVFETLPGESYFRGRPRSGAWSVGVAASGXXXXXXXXXX---------------------------------GRRRWPRVEDSVRAGRCSLAVVIRPAAGAETGDWAGWRHRPTHRVTRQV 444
            ALVHTRQAYPPK+MPC+LL+ASDP    G+KAILHP + G    + P            XXXXX       E G    PLVG+SVVLDCRVACTVELLWDVDLTLLG+EMGLHPKLHLLPASTG   S                                                 S SS  SL G+ WAS VSAS  L RAG  RWG R+A GAPPDSS+       P                   G    D DEEMG R  G    XXXXXXXXXXXXXXXXXXXXXX                                   RSWAASLGLRKSSV N A GG G++     +AG G TVGQ LG              PG  M GLCGKRTVPRALSAGG RVF TLPGESYFRGR +SG W+ G  A+         XX                                 G R WPRV DSVRAGRCSLA+VIRPAAG ETGDWAGWRHRPTHRVTRQV
Sbjct:   84 ALVHTRQAYPPKTMPCSLLVASDP---DGVKAILHPRDSGDDIQVDPPXXXXXXXXXXXXXXXXGALGARAEAG----PLVGVSVVLDCRVACTVELLWDVDLTLLGREMGLHPKLHLLPASTGAGGSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVSSLSSLPGNAWASAVSASRRLFRAGRERWGSRVA-GAPPDSSSRPLGSRGPGRXXXXXXXXXXXXXXXXSGYPSNDVDEEMGGRGVGGALGXXXXXXXXXXXXXXXXXXXXXXDDNLGATAAEAVLASLDGQGARRAGTGNGGSGGAGRSWAASLGLRKSSVFN-AGGGDGSD-----AAGAGGTVGQALGFXXXXXXXXXXXXXPGVGMIGLCGKRTVPRALSAGGGRVFTTLPGESYFRGRQQSGEWNAGATATSAAGAAKTGXXXXXXVDGRATSAVSAFVXXXXXXXXXXERRPAAGGRDWPRVGDSVRAGRCSLAIVIRPAAGGETGDWAGWRHRPTHRVTRQV 597          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig19249.5695.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5K7X0_9PHAE1.280e-8850.60RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
D7FQX1_ECTSI2.140e-8848.30RING-type E3 ubiquitin transferase n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig19249contigL-elsbetiae_contig19249:120..1864 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig19249.5695.1mRNA_L-elsbetiae_contig19249.5695.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig19249 120..1864 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig19249.5695.1 ID=prot_L-elsbetiae_contig19249.5695.1|Name=mRNA_L-elsbetiae_contig19249.5695.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=444bp
QALVHTRQAYPPKSMPCTLLLASDPLPGGGMKAILHPLERGSRDSLTPAD
GDPASPAAAATAAGAAAAAVEEEVGEDTGPLVGLSVVLDCRVACTVELLW
DVDLTLLGKEMGLHPKLHLLPASTGGDSSSSRSNVINVIGGSGTSAGAAA
PADRSNSSRHSLVGDLWASVVSASGALGRAGSGRWGGRIAAGAPPDSSAP
SARVRQGSGWREGGLAAIVGDEDEEMGRRRGGSGTAAAAIAVTAASGGGV
NGNGNGSAGTAGAGAATRRGGGGGGGGPIGSRSWAASLGLRKSSVLNGAH
GGSGAEDDDENSAGVGSTVGQILGIGGRGRGASVPGARMGLCGKRTVPRA
LSAGGSRVFETLPGESYFRGRPRSGAWSVGVAASGGAAAGGGPTGGRRRW
PRVEDSVRAGRCSLAVVIRPAAGAETGDWAGWRHRPTHRVTRQV
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