prot_L-elsbetiae_contig1924.5689.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1924.5689.1
Unique Nameprot_L-elsbetiae_contig1924.5689.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length273
Homology
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 381 bits (978), Expect = 5.770e-131
Identity = 190/269 (70.63%), Postives = 221/269 (82.16%), Query Frame = 0
Query:    4 NPVRAASSRFLSPRGFLCYKLLATVYFVFWSFFWPIEENIDDAHEFVTYWEWYMATIYFLVSACTACMFFGAPTASSGPVRGTHAMG-HRHAGGGHDQPLSSCRRILLGFQISAWNVATIGSLVVVTVFWTTLYDGSRLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVIYSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIYETCGKGSGSSSPYPKDIENGGVVPAIFS 271
            +PVRA +SRFLS R FLCYK++AT+YFVFW +FWP  E+IDDAH+FVTYW WYMA IYFLVS  TA  F G+P AS GPVRGTHA+  HR   G  +QPLSS RR LLGFQ+ +WNVA +GSLV+VTVFW  L+D + L+STDVNAH++IA VMAIDQLLVATKFERKQM+ASF+FS+ YV FNIV+FLTAP+DERVIY  MDWG+SVGNSAA A ++ FVLVP+ G+IHYCVFRLRE+IYETCG GS  SS    DIE GGVV AIFS
Sbjct:   17 DPVRAVTSRFLSQRSFLCYKVIATIYFVFWCYFWPFGEDIDDAHKFVTYWGWYMAAIYFLVSTATAYSFLGSPMASDGPVRGTHAVAPHR---GNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFRLREYIYETCGGGSRPSSH--SDIEEGGVVTAIFS 280          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 267 bits (683), Expect = 1.860e-87
Identity = 137/195 (70.26%), Postives = 160/195 (82.05%), Query Frame = 0
Query:   78 ASSGPVRGTHAMG-HRHAGGGHDQPLSSCRRILLGFQISAWNVATIGSLVVVTVFWTTLYDGSRLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVIYSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIYETCGKGSGSSSPYPKDIENGGVVPAIFS 271
            AS GPVRGTHA+  HR   G  +QPLSS RR LLGFQ+ +WNVA +GSLV+VTVFW  L+D + L+STDVNAH++IA +MAIDQLLVATKFERKQM+ASF FS+ YV FNI++FLTAP+DERVIY  MDWG+SVGNSAA A ++ FVLVP+ G+IHYCVFRLRE+IYETCG GS  SS    DIE GGVV AIFS
Sbjct:    2 ASDGPVRGTHAVTPHR---GNRNQPLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFRLREYIYETCGSGSRPSSH--SDIEKGGVVTAIFS 191          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 4.250e-23
Identity = 73/248 (29.44%), Postives = 124/248 (50.00%), Query Frame = 0
Query:    3 QNPVRAASSRFLSPRGFLCYKLLATVYFVFWSFFWPIEENIDDAHEFVTYWEWYMATIYFLVSACTA--CMFF-----GAPTASSGPVRGTHAMGHRHAGGGHDQPLSSCRRILLGFQISAWNVATIGSLVVVTVFWTTLYDGSRLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVIYSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIY 243
            Q  +RA +SRFL    F+ +K + T+Y + W+ +W   E++D      T W   +AT YF++S  ++  CM +      AP     P R     G R        P+    R L   Q  +W +  I S+VV++VFW T+Y+     ++   +  I+A++M +DQ L+AT+ + K       F V Y+ +N++++     ++RV + V DW +  G +     +I+   VP    +H  V+RLRE +Y
Sbjct:   31 QQGLRAGTSRFLQQGWFVGWKAVMTIYCIVWAAWWDRGEDLDIRIYLAT-WTHMLATAYFVISLISSLLCMAYLSREKPAPVEEGKPKRPPPVKGTR-------SPVPCYFRWL---QHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSSTILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYRLRERMY 267          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: D7FX10_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX10_ECTSI)

HSP 1 Score: 98.2 bits (243), Expect = 2.190e-21
Identity = 53/141 (37.59%), Postives = 84/141 (59.57%), Query Frame = 0
Query:  107 RILLGFQISAWNVATIGSLVVVTVFWTTLYDGSRLSST---DVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVIYS-VMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIY 243
            R L   Q+  WN+A I SL+V  V+ +  Y       T   DV AH ++A  M +DQLL+A  F+   M+ + ++ + Y+ F+++WF   P+DE+ +Y   +DWG++   +  +  + V VLVPIAG++H  VFRLRE +Y
Sbjct:   13 RGLRWLQLVLWNIACIASLLVTFVWASEDYVRQVRQGTKNFDVQAHGLVAFFMLVDQLLIADTFKLGHMIFTQIYGLVYLAFSVIWFYKGPEDEKYLYEDTLDWGENRLQACLSGGVAVGVLVPIAGLLHLVVFRLREALY 153          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: A0A6H5JVA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVA0_9PHAE)

HSP 1 Score: 95.1 bits (235), Expect = 1.770e-19
Identity = 52/141 (36.88%), Postives = 84/141 (59.57%), Query Frame = 0
Query:  107 RILLGFQISAWNVATIGSLVVVTVFWTTLYDGS---RLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVIYS-VMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIY 243
            R L   Q+  WN+A I SL+V  V+ T  Y       + + DV AH ++A  M +DQLL+A  ++   M+ + ++ + Y+ F++VWF   P+DE+ +Y   +DW ++   +  +  + V VLVPIAG++H  VFRLRE +Y
Sbjct:   95 RGLRWLQLVLWNIACIASLLVTFVWATEDYVRQVRQGVKNFDVQAHGLVAFFMLVDQLLIADTYKLGHMIFTQIYGLVYLAFSVVWFYNGPEDEKYLYEDTLDWDENRLQACLSGGVAVGVLVPIAGLLHLGVFRLREALY 235          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: A0A6P8IF28_ACTTE (protein rolling stone-like n=2 Tax=Actinia tenebrosa TaxID=6105 RepID=A0A6P8IF28_ACTTE)

HSP 1 Score: 66.6 bits (161), Expect = 3.770e-9
Identity = 59/258 (22.87%), Postives = 115/258 (44.57%), Query Frame = 0
Query:   10 SSRFLSPRGFLCYKLLATVYFVFWSFFWPIEENIDDAHE---FVTYWEWYMATIYFLVS----ACTACMFFGAPTASSGPVRGTHAMGHRHAGGGHDQ--PLSSCRRILLGFQI-------SAW---NVATIGSLVVVTVFWTTLY-DGSRLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDER---VIYSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIYE 244
            +S ++SP  F+ Y+ +  +Y   W     +   +DD  +   F+T W +    ++F++     A   C++      S                   D   PLS    + L           ++W   N+A    L+V  ++W  +Y  G  +  +++NAH I +V++A+D LL    F    ++   ++S  Y  F IV++     +E     IY++M++G+S G +   A + V + VP++  + Y ++R R ++ E
Sbjct:   22 TSPWMSPLFFITYRAMIALYTTIWQIL-GVVYRVDDGFKWFIFLTNWSYTFLNVHFIIGTLLPAYYHCLYNKRKIVSCDANAXEQPRNDEVVEINLDNGCPLSEKPELALRHPWMLIITCKASWVVYNIAANVGLLVTLMYWCFVYVPGQYVDGSNINAHAINSVLIALDMLLSRAPFRVFHLIYPVLYSFIYSLFTIVYWAAGGTNENGKPYIYAIMNYGESAGLAVLMAAMFVLLAVPLSQFLLYGLYRFRMWLAE 278          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: UPI000A2A6325 (protein rolling stone n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A6325)

HSP 1 Score: 60.1 bits (144), Expect = 6.160e-7
Identity = 48/200 (24.00%), Postives = 89/200 (44.50%), Query Frame = 0
Query:   49 FVTYWEWYMATIYFLVSACTACMFFGAPTASSGPVRGTHAM----GHRHAGGGHDQPLSSCRRILLGFQISAW---NVATIGSLVVVTVFWTTLYDGSRLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVIYSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREF 241
            ++T W +++  IYF VSA +    +     +    R  H      GH H   G+ +           FQ + W   +V+   +L V   FW  +YDG+ ++ +DVN H++ +V M ID  L +       M+    F+  Y+   ++++    K+   IY   D+ ++   +    L+ + V  P+    +Y  +RLR +
Sbjct:   67 YLTNWSYFVLIIYFFVSAVSTIFEY-----TKQRQRQVHTADAERGHAHTTEGNAR----------WFQQAQWLFYSVSATMALGVTFFFWLFVYDGTGVTLSDVNVHILNSVFMLIDHSLSSMPVRLFHMIYPMAFTXLYMIATMLYWAFISKE--YIYKATDYNNNPLQAIGIFLLGILVAGPVIHTFYYATYRLRRY 249          
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Match: A0A7M7PB47_STRPU (Uncharacterized protein n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7PB47_STRPU)

HSP 1 Score: 56.2 bits (134), Expect = 1.400e-5
Identity = 36/138 (26.09%), Postives = 72/138 (52.17%), Query Frame = 0
Query:  113 QISAWNVATIGSLVVVTVFWTTLY-DGSRLSSTDVNAHLIIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDER---VIYSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIYETC 246
            Q   +N+    +++V  ++W  LY  G+     D+N H +  +V  I+  L AT       +  F+F+  YV F  +++     D++    IYSV+D+G S+G +A  +++ V  +V I  +I + + +L+  +++ C
Sbjct:  123 QWMLFNMYASVAILVSILYWGALYVPGTNDLYYDINFHTLNGIVALIEIFLSATIIRILHFIYPFMFAAAYVVFAGIYYAVGGTDQKGNPYIYSVLDFGASLGFAAGLSVVAVVAVVIIHILIVWGLHKLKVLVFDRC 260          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1924.5689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
A0A6H5JMZ5_9PHAE5.770e-13170.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G735_ECTSI1.860e-8770.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G733_ECTSI4.250e-2329.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FX10_ECTSI2.190e-2137.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JVA0_9PHAE1.770e-1936.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6P8IF28_ACTTE3.770e-922.87protein rolling stone-like n=2 Tax=Actinia tenebro... [more]
UPI000A2A63256.160e-724.00protein rolling stone n=1 Tax=Exaiptasia diaphana ... [more]
A0A7M7PB47_STRPU1.400e-526.09Uncharacterized protein n=1 Tax=Strongylocentrotus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 13..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..136
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 148..165
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..272
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 166..171
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 213..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 76..115
NoneNo IPR availableTMHMMTMhelixcoord: 214..236
NoneNo IPR availableTMHMMTMhelixcoord: 114..136
NoneNo IPR availableTMHMMTMhelixcoord: 146..165
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 20..37
NoneNo IPR availableTMHMMTMhelixcoord: 172..194
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 13..251

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1924contigL-elsbetiae_contig1924:1374..4707 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1924.5689.1mRNA_L-elsbetiae_contig1924.5689.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1924 71..5045 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1924.5689.1 ID=prot_L-elsbetiae_contig1924.5689.1|Name=mRNA_L-elsbetiae_contig1924.5689.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=273bp
MSQNPVRAASSRFLSPRGFLCYKLLATVYFVFWSFFWPIEENIDDAHEFV
TYWEWYMATIYFLVSACTACMFFGAPTASSGPVRGTHAMGHRHAGGGHDQ
PLSSCRRILLGFQISAWNVATIGSLVVVTVFWTTLYDGSRLSSTDVNAHL
IIAVVMAIDQLLVATKFERKQMVASFVFSVTYVTFNIVWFLTAPKDERVI
YSVMDWGDSVGNSAATALIIVFVLVPIAGVIHYCVFRLREFIYETCGKGS
GSSSPYPKDIENGGVVPAIFSH*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost