prot_L-elsbetiae_contig1923.5688.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1923.5688.1
Unique Name	prot_L-elsbetiae_contig1923.5688.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	527

Homology

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: D7G7Z6_ECTSI (START domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Z6_ECTSI)

HSP 1 Score: 394 bits (1011), Expect = 3.210e-127
Identity = 207/284 (72.89%), Postives = 222/284 (78.17%), Query Frame = 0

Query:    1 MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKLEEVAGKWDEQAALTKSMPCKGRGFADKPCAFLLSPTDGSQEADGLASGAGMAMAGRG--WPPHIAILTMAALLCGGWLAWFGWPAPSEHKEPSPAAKSEGKGSKETNGTISGADATRALPATHE 282
            MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDG DLEVIDRDNKVSWS TMG+WPCRPRDFVTHI+RATL+DGSVAIVNSAT+HPKAPA GKYVRGEILHGVFHIKAAK NKKHSEFTMVHHF+PGGNIPPWL+NWLAEGKP  FV+KLEEVA KWD QAALTKSMPCKGRGFADKPCAFLL   D S+E D LA             W   +  LTMAALL   W  +F   A    K    AA      ++E +GT+    +  ALPA HE
Sbjct:   68 MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPAGGKYVRGEILHGVFHIKAAK-NKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDRQAALTKSMPCKGRGFADKPCAFLLPTGDSSEEGDTLAXXXXXXXXXXXXEWGSLVKALTMAALLAYAWALFFDRRAVFGKKGEPSAAGPGRMPAEEKSGTL---HSRVALPAKHE 347

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A6H5KXT6_9PHAE (START domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXT6_9PHAE)

HSP 1 Score: 392 bits (1008), Expect = 1.620e-126
Identity = 202/257 (78.60%), Postives = 215/257 (83.66%), Query Frame = 0

Query:    1 MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKLEEVAGKWDEQAALTKSMPCKGRGFADKPCAFLLSPTDGSQEADGLASGAGMAMAGRG---WPPHIAILTMAALLCGGWLAWFGWPAPSEHK-EPSPA 253
            MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDG DLEVIDRDNKVSWS TMG+WPCRPRDFVTHI+RATL+DGSVAIVNSAT+HPKAP   KYVRGEILHGVFHIKAAK NKKHSEFTMVHHF+PGGNIPPWL+NWLAEGKP  FV+KLEEVA KWD+QAALTKSMPCKGRGFADKPC FLL   D S+E D LA+ A  A AG G   W   +  LT+AALL   W  +F  PA    K EPS A
Sbjct:   99 MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGIDLEVIDRDNKVSWSATMGIWPCRPRDFVTHIQRATLEDGSVAIVNSATSHPKAPVGEKYVRGEILHGVFHIKAAK-NKKHSEFTMVHHFSPGGNIPPWLMNWLAEGKPITFVRKLEEVAKKWDQQAALTKSMPCKGRGFADKPCDFLLPTGDSSEEGDTLAAPA-RAAAGSGGGEWGSLVKALTLAALLAYAWALFFDRPAVFGKKGEPSAA 353

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A835YMA7_9STRA (START domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA7_9STRA)

HSP 1 Score: 203 bits (517), Expect = 3.730e-55
Identity = 103/215 (47.91%), Postives = 135/215 (62.79%), Query Frame = 0

Query:    1 MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGK---YVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKLEEVAGKWDEQAALT-------------KSMPCKGRGFADKPCAFLLSPTDGS 199
            MP+S F+ +K+ A++  SP AL EVL PG+++IV+ YNP++ +G D+E + RD+K+SWS+TM +WPCR RDFVT I R  L DG  AI+  ATTHP+ PA G     VR EILHG+F ++        S+FTMV H NPGG IP WL N LA   PA+FV  L  VA ++D  AA T             +S PC  RGF   PC +LL+ T G+
Sbjct:   73 MPDSAFIFVKAMATIDASPVALREVLAPGELDIVKMYNPVITEGRDIEYLGRDSKISWSSTMPMWPCRGRDFVTFINRIRLPDGGTAIIQKATTHPQYPAPGPGYDTVRAEILHGLFLVQPVPGESHRSQFTMVQHLNPGGKIPAWLTNQLAARTPASFVTALGRVAQRFDAVAAATANDATTTKGSKGSRSGPCFDRGFDSPPCPWLLNMTQGT 287

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: B8CFB1_THAPS (START domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFB1_THAPS)

HSP 1 Score: 82.8 bits (203), Expect = 6.590e-13
Identity = 58/187 (31.02%), Postives = 81/187 (43.32%), Query Frame = 0

Query:   34 VRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPA-----KGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEG----KPAAFVKKLEEVAGKWDEQAALT------KSMP---CKGRGFADKPCAFLLSPTDGSQEA 202
            V QYN LVED +D+EVI   +K++W+    V   +PRDFVT        DG+  IVN A  H   P      +G   RG  L G   I     +   +  T++ H NPGG +P W +N         +P      + E A  + E A+ +       S+P    K  G A    A+      G +EA
Sbjct:  565 VPQYNELVEDHADVEVITPHSKITWTLMPKVLFVKPRDFVTFCSHRWKRDGTQVIVNQACDHEDVPGNMVEGEGDVTRGFALRGANFISKDPDDPHKTRITILAHANPGGGLPQWALNTAVNAAVQIEPFKLFYSINEGASNYKESASFSPQTTTMNSLPGRSTKPAGMAQMGYAYFWPQGGGPKEA 751

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A448ZKN5_9STRA (START domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZKN5_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 1.500e-7
Identity = 42/144 (29.17%), Postives = 70/144 (48.61%), Query Frame = 0

Query:   35 RQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAP-----AKGKY-VRGEILHGVFHIKAAKH-------NKKHSEFTMVHHFNPGGNIPPWLINW----LAEGKPAAFVKKLE 161
            R+YN L+ D  D+EV+   +K+ WS +  +   +PRDFVT+ R   L DG+  I N A  HP A      + G+  +R    +  F ++ A +         K ++  M+ H N G ++P W +      LA  KP   + +++
Sbjct:  170 REYNSLLIDQEDVEVLTPHSKICWSQSKKLLFIQPRDFVTYCRHRWLKDGTQLITNQACDHPNATLNITGSNGQNSIRNLSGYRAFSLRGATYVSRCPDFPSKRTKIVMLSHCNCGRDVPEWAVRAAVGVLAPIKPFEIIHRID 313

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A7S4AYL9_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AYL9_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 4.810e-7
Identity = 48/166 (28.92%), Postives = 77/166 (46.39%), Query Frame = 0

Query:   36 QYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKY--VRGEILHGVFHIKAAKHNKKHSEFT-------MVHHFNPGGNIPPWLINW----LAEGKPAAFVKKLE----------EVAGKWDEQAALTKSMP 178
            +YN L+ D  DLE++   +K+ WS T  +   +PRDFVT+ R   L+DG+  I N A  H  + A G Y   +    +  F+++ A +  +  +F        M+ H N G ++P W I      LA  KP   + ++           E+A K +   + T S P
Sbjct:  271 EYNSLLVDQEDLEILTPHSKICWSQTKKLLFIQPRDFVTYCRHRWLNDGTQLITNQACDH-HSTAIGDYNTKQNRSRYRAFNLRGATYISRCPDFPSERTKLIMLSHCNCGQDMPEWSIRTAVSVLAPIKPFEIIHRITIGILQAREELEIAEKKESTKSTTISTP 435

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A3N7D178_9SPHI (Lipid-binding protein n=1 Tax=Pedobacter sp. KBW06 TaxID=2153359 RepID=A0A3N7D178_9SPHI)

HSP 1 Score: 59.3 bits (142), Expect = 2.170e-6
Identity = 40/160 (25.00%), Postives = 72/160 (45.00%), Query Frame = 0

Query:    2 PNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKLE 161
            PNS   A+K++ ++  +   +  +L   D+E    +    +  S ++ +       +S     WP + RDFV H++ +      V  ++      +   K   VR +   G + I  A  +  + E+T+  H +PGG +PPWLIN  A   P   +K L+
Sbjct:   41 PNSRIKAVKAQCNVKATASQVVALLM--DVESATDWVYHTKSCSLIKKVSPAELYYYSEISLPWPLQNRDFVAHLKVSQNTGTKVVTIDGPAVRGQVAEKKGIVRIQDSKGKWVISPAGPDYVNIEYTI--HVDPGGTLPPWLINLFASEGPLKIIKNLK 196

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A1M4WJH7_9SPHI (START domain-containing protein n=1 Tax=Pedobacter caeni TaxID=288992 RepID=A0A1M4WJH7_9SPHI)

HSP 1 Score: 57.8 bits (138), Expect = 7.210e-6
Identity = 40/161 (24.84%), Postives = 72/161 (44.72%), Query Frame = 0

Query:    1 MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKLE 161
            +PNS   A+K++ ++  +   +  +L   D+E    +    +  + ++ +  D    +S     WP + RDFV H++ +      V  ++          K   VR +   G + I  A     + E+T+  H +PGG +PPWLIN  A   P   +K L+
Sbjct:   40 LPNSRIKAVKAQCNVKATASQVVALLM--DVESAVDWVYHTKSCTLIKRVSPDEIYYYSEISLPWPLQNRDFVAHLKVSQNAVTKVVTIDGPAVKGYVAEKKGIVRIQDSKGKWIISPAGAGHVNIEYTI--HVDPGGTLPPWLINMFAAEGPLRIIKNLK 196

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A1G9KYH0_9SPHI (START domain-containing protein n=1 Tax=Pedobacter steynii TaxID=430522 RepID=A0A1G9KYH0_9SPHI)

HSP 1 Score: 57.8 bits (138), Expect = 7.210e-6
Identity = 40/160 (25.00%), Postives = 70/160 (43.75%), Query Frame = 0

Query:    2 PNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVIDRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKLE 161
            PNS   A+K++ ++  +   +  +L   D+E    +    +  S +  +       +S     WP + RDFV H++ +      V  ++          K   VR +   G + I  A  +  + E+T+  H +PGG +PPWLIN  A   P   +K L+
Sbjct:   41 PNSGIKAVKAQCNVKATASQVVALLM--DVESATDWVYHTKSCSLIRKVSPAELYYYSEISLPWPLQNRDFVAHLKVSQNAVTKVVTIDGPAVKGHVAEKKGIVRIQDSKGKWVISPAGTDNVNIEYTI--HVDPGGTLPPWLINMFAAEGPLRIIKNLK 196

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BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Match: A0A1D7QNM2_9SPHI (Lipid-binding protein n=1 Tax=Pedobacter steynii TaxID=430522 RepID=A0A1D7QNM2_9SPHI)

HSP 1 Score: 55.1 bits (131), Expect = 5.880e-5
Identity = 31/96 (32.29%), Postives = 44/96 (45.83%), Query Frame = 0

Query:   65 WPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPAKGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAEGKPAAFVKKL 160
            WP + RDFV H+  +   D  V  ++        P K   VR     G + I  +  +    E+T+  H +PGG +PPWLIN  A   P   +K L
Sbjct:  102 WPLQNRDFVAHLTVSQNRDTKVVTIDGPAVRGHVPEKEGIVRIMDSKGKWVISPSGTDHVSIEYTI--HVDPGGTLPPWLINMFASEGPLRIIKNL 195

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1923.5688.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 10


Match Name	E-value	Identity	Description
D7G7Z6_ECTSI	3.210e-127	72.89	START domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A6H5KXT6_9PHAE	1.620e-126	78.60	START domain-containing protein n=1 Tax=Ectocarpus...	[more]
A0A835YMA7_9STRA	3.730e-55	47.91	START domain-containing protein n=1 Tax=Tribonema ...	[more]
B8CFB1_THAPS	6.590e-13	31.02	START domain-containing protein n=1 Tax=Thalassios...	[more]
A0A448ZKN5_9STRA	1.500e-7	29.17	START domain-containing protein n=1 Tax=Pseudo-nit...	[more]
A0A7S4AYL9_9STRA	4.810e-7	28.92	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]
A0A3N7D178_9SPHI	2.170e-6	25.00	Lipid-binding protein n=1 Tax=Pedobacter sp. KBW06...	[more]
A0A1M4WJH7_9SPHI	7.210e-6	24.84	START domain-containing protein n=1 Tax=Pedobacter...	[more]
A0A1G9KYH0_9SPHI	7.210e-6	25.00	START domain-containing protein n=1 Tax=Pedobacter...	[more]
A0A1D7QNM2_9SPHI	5.880e-5	32.29	Lipid-binding protein n=1 Tax=Pedobacter steynii T...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR023393	START-like domain superfamily	GENE3D	3.30.530.20		coord: 1..169 e-value: 8.7E-32 score: 112.3
IPR002913	START domain	PFAM	PF01852	START	coord: 42..160 e-value: 2.5E-17 score: 63.0
IPR002913	START domain	PROSITE	PS50848	START	coord: 1..169 score: 15.464
None	No IPR available	PANTHER	PTHR19308:SF14		coord: 9..314
None	No IPR available	PANTHER	PTHR19308	PHOSPHATIDYLCHOLINE TRANSFER PROTEIN	coord: 9..314
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 222..241
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..221
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 242..526
None	No IPR available	SUPERFAMILY	55961	Bet v1-like	coord: 4..163

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1923	contig	L-elsbetiae_contig1923:16782..19973 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1923.5688.1	mRNA_L-elsbetiae_contig1923.5688.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1923 15738..19991 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1923.5688.1 ID=prot_L-elsbetiae_contig1923.5688.1|Name=mRNA_L-elsbetiae_contig1923.5688.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=527bp
MPNSDFVAIKSKASLAVSPQALFEVLTPGDIEIVRQYNPLVEDGSDLEVI
DRDNKVSWSTTMGVWPCRPRDFVTHIRRATLDDGSVAIVNSATTHPKAPA
KGKYVRGEILHGVFHIKAAKHNKKHSEFTMVHHFNPGGNIPPWLINWLAE
GKPAAFVKKLEEVAGKWDEQAALTKSMPCKGRGFADKPCAFLLSPTDGSQ
EADGLASGAGMAMAGRGWPPHIAILTMAALLCGGWLAWFGWPAPSEHKEP
SPAAKSEGKGSKETNGTISGADATRALPATHEAPPRERPSSDRQEIGEEE
VASEETVVERHVGESLSREAQGEEQPDVDSLNGEVPNGEVPNGEVPSGVG
SSAEEEPGKEVPEPVGGEHASRKGEGTTSSSPPAATTARTSAAIAAEGEV
PEGIGALPDPLSATQEEPGIATLGGKKTSKDSPKGQAACVEQNGGGSKDF
SETEAQEANYAIGEPSIGVVGNAANKDGEATTAGDVVNGEVRDRNEFSGE
SIAARREFRENSLFLFGDKPFDNSMG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023393	START-like_dom_sf
IPR002913	START_lipid-bd_dom