prot_L-elsbetiae_contig192.5674.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig192.5674.1
Unique Nameprot_L-elsbetiae_contig192.5674.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length119
Homology
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BLAST of mRNA_L-elsbetiae_contig192.5674.1 vs. uniprot
Match: D7FUE4_ECTSI (Aminotran_1_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUE4_ECTSI)

HSP 1 Score: 55.1 bits (131), Expect = 2.220e-6
Identity = 25/28 (89.29%), Postives = 27/28 (96.43%), Query Frame = 0 
Query:    1 RSAKPGRWRPGPQRTQYKEYARSALASG 28
            R+A PGRWRPGPQRTQYKEYARSALA+G
Sbjct:  121 RNAIPGRWRPGPQRTQYKEYARSALAAG 148
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BLAST of mRNA_L-elsbetiae_contig192.5674.1 vs. uniprot
Match: A0A836C7I6_9STRA (Pyridoxal phosphate-dependent transferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7I6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 7.600e-6
Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0 
Query:    1 RSAKPGRWRPGPQRTQYKEYARSALASGDPVT 32
            R A+PG+WRPGPQRTQYKEYARSA A+G   T
Sbjct:  103 RQAEPGKWRPGPQRTQYKEYARSAQAAGFSTT 134
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig192.5674.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUE4_ECTSI2.220e-689.29Aminotran_1_2 domain-containing protein n=2 Tax=Ec... [more]
A0A836C7I6_9STRA7.600e-675.00Pyridoxal phosphate-dependent transferase n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 114..118
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig192contigL-elsbetiae_contig192:46987..47343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig192.5674.1mRNA_L-elsbetiae_contig192.5674.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig192 46987..47365 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig192.5674.1 ID=prot_L-elsbetiae_contig192.5674.1|Name=mRNA_L-elsbetiae_contig192.5674.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=119bp
RSAKPGRWRPGPQRTQYKEYARSALASGDPVTVGRVEVWRGFHRPHQITR
RFSGDKQVYRCCPFSPTSCIACGSGGSSWLWRPSRSRIARVKSTIIARFA
LFRLLSVAVSNAARKDSQ*
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