prot_L-elsbetiae_contig1881.5509.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1881.5509.1
Unique Nameprot_L-elsbetiae_contig1881.5509.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length1257
Homology
BLAST of mRNA_L-elsbetiae_contig1881.5509.1 vs. uniprot
Match: A0A6H5KQR3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQR3_9PHAE)

HSP 1 Score: 384 bits (985), Expect = 6.040e-116
Identity = 291/589 (49.41%), Postives = 331/589 (56.20%), Query Frame = 0
Query:  728 GPTAVETPKTALAGLPVNQGAGRSRFDSRLDERSAVAATAXXXXXEDGKTVRLAXXXXXXXXXXXLGGVRHSGLPGSSVLRHGVRRQLFSENSEAKPLVFCPFCGEGVISPGGLRGHLQVCYVLDRCRGSETHKQVEVAIKAISVEPPRKHS---THAVDAVFSLDNEESFEGSTVLQQAPPASLSQTATSGFGSTGNGPENVLV-------SEIPRV------GGGAGPEASGAGLEFSLGEGEGA---VERCEGCGRTFAPGRLQSHAKACRSVFLERRRPYDPRAMRARGTPLEFFQQPIGASTPDGDPSNSGKKGDHGKKASPVARRGVGVGXXXXXXXXXXXXXXXXXXXXXXXXXXNHVSPG-FRGSVGAAK-PARGGGGGVAG----RTNWTAAK-LPVVEGSAHCPFCSRSVPRAKLSAHLLRCKRPRSAQSAPKPEVRRRRTYFGSSCVSSIISADETLDNDNSVLGXXXXXGIGN---HATRKVRCPHCDRGFSPSVAPTHISICARVENRPKSATTNPNIA-------------------------------HGAPQKDLGGTRRVQEEKARIMPPFY 1256
            G +A ETP TALAG+P  Q        S    RSA A T        G  V    XXXXXXXXXX  G     LPGSSVLRH VRRQLFSE+SEA+PLVFCPFCGEGV+   GLR HLQ CYVLDRCRGSETHKQVEVAIKA+SVE     S   TH   A  S  N+ SF+ S+ L Q         A S F S GN PENVL        SE+ RV       G AG E SG   E S G G       ERCE CGRTFAPGRL+SHAKACRSVFLERRRPYDP+AMRARGTPLEFFQQPIGA++ D +P+ SGK GD G  A+  +RRGVG                            + VSPG    SVG     +RG GG V G    R+   A K LP VEG AHCPFCS S+PRAKLSAHLLRCK+ R +Q+ P+P+        G+   ++ +  ++      +  G XXXX       +A+RKVRCPHC RGFSP+VAPTHISICARVENRPK + T    A                               HG+             EKAR+MPPFY
Sbjct:   33 GASAAETPTTALAGVPGYQ--THHHHPSSRSRRSAQADTVRY----SGSGVGGGNXXXXXXXXXXSEG--RGLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRARGLRDHLQECYVLDRCRGSETHKQVEVAIKAVSVENQMHTSATNTHGRRA--SSLNDGSFQDSSTLLQH--------ALSPFVSKGNDPENVLAPAVASENSELGRVVATGGLRGTAGGEVSGVSSEVSSGGGGAGGAKFERCEDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSD-NPTTSGKGGDGGGNAA--SRRGVG-----RNKPSSVGGSSVRREGSSESGDADRVSPGGLDVSVGTGGGSSRGVGGEVGGSFLRRSKKVALKTLPAVEGRAHCPFCSSSIPRAKLSAHLLRCKKLRRSQTCPRPKTGPSPRISGTDASNATVIHEDDKARTATYNGGXXXXXXXXXXXNASRKVRCPHCLRGFSPAVAPTHISICARVENRPKGSGTAKAAAARKDDAQKKVALGVGYTDASPPGGRKGLAASHGSSGAXXXXXXXXXPEKARVMPPFY 595          
BLAST of mRNA_L-elsbetiae_contig1881.5509.1 vs. uniprot
Match: D8LFQ9_ECTSI (WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFQ9_ECTSI)

HSP 1 Score: 402 bits (1032), Expect = 1.110e-115
Identity = 449/1112 (40.38%), Postives = 512/1112 (46.04%), Query Frame = 0
Query:   85 QRKGSRFVVGRSRERLSAAACMGXXXXRPGDGGFGAGRGLGAAAPRADGVAAEKGAEMATRLVSVGHDEWKEACTAEGKIYYYNRRTRVPRWTLPPTATYVPDPERPAGYRIFASATAAVSVN---KSTAXXXXXXXXXXXTSGKKAIRKVGVARGTIDKASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSAMQRFVVHKSGLWASSLRPTGPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDSPTAS-PEQSAEDARPPVPQIDPTG---AAATAVASACPAADGARPEPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAVSPGQEAAR--DGGAERGAA--GSVVVPSPAGATTFTTPAAGRRVRTEEGSREXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTLTDFVHTVRVESGGRCDPSAPFPGSRAAADR-----AGTSKYIENTGMEDEXXXXXXXXXXVVFSSWRSPGTLRRRPLGPVRRSDELGYPLPS-SRADTCCRSSSGGKKPGP------TAVETPKTALAGLPVNQGAGRSRFDSRLDERSAVAATAXXXXXEDGKTVRLAXXXXXXXXXXXLGGVRHSGLPGSSVLRHGVRRQLFSENSEAKPLVFCPFCGEGVISPGGLRGHLQVCYVLDRCRGSETHKQVEVAIKAISVEPPRKHS---THAVDAVFSLDNEESFEGSTVLQQAPPASLSQTATSGFGSTGNGPENVLV-------SEIPRV---GGGAGP---EASGAGLEFSLGEGEGA---VERCEGCGRTFAPGRLQSHAKACRSVFLERRRPYDPRAMRARGTPLEFFQQPIGASTPDGDPSNSGKKGDHGKKASPVARRGVGVGXXXXXXXXXXXXXXXXXXXXXXXXXXNHVSPG-FRGSVGAAK-PARGGGGGVAG----RTNWTAAK-LPVVEGSAHCPFCSRSVPRAKLSAHLLRCKRPRSAQSAPKPEV 1147
            Q + SRFVVGRS ER+SAA  MG  XX                     GVAA      A  L++V HDEWKEA TAEGKIYYYNRRTRVPRWTLPPTAT+VPDP RPAGYRIFA A A V++N   KSTA           TSG +       + G ID                                                                              XXXXXXXXXXXX SA  +  V  +G        T                                                 TAS  E++ +D + P   + PT    + +   + + P+A G                                             XXXXXXXXXXXXXXXXG+AV  G+   R  + G E G+A    V+   PA  TT         VR  E   E                                                 XXXXXXXXXXXXXXXXXXX   +L DFVH VRV+SGGR D S   P SR+   R     AG  +  +    +D+            FSS R PGT  RRPLGPVRRS+E+ +PL S S       S  G ++P        TA ETP TALAG+PV Q        S    RSA A T        G  V               GG     LPGSSVLRH VRRQLFSE+SEA+PLVFCPFCGEGV+  GGLR HLQ CYVLDRCRGSETHKQVEVAI+A+SVE     S   TH   A  SL+     + ST+LQ A P          F S GNGPENVL        SE+  V   GGG G    E SG GLE SLG G       ERC  CGRTFAPGRL+SHAKACRSVFLERRRPYDP+AMRARGTPLEFFQQPIGA++ DG+PS SG  GD G  A+  +RRGVG                            + VSPG    SVG     +RG GG V G    R+   A K LP VEGSAHCPFCS S+PRAKLSAHLLRCK+ R +Q+ P+PE 
Sbjct:  238 QTESSRFVVGRSSERMSAAESMGRGXXXXXXXXXXXXXXXXXXXXCLGGVAAA--GHDAAELLTVEHDEWKEARTAEGKIYYYNRRTRVPRWTLPPTATFVPDPNRPAGYRIFALA-ATVNINIGDKSTAPASA-------TSGSER-----TSGGVIDPL---------------LRGPGGAGAGGAREADSSRERFGRDNSGGGGAPLLIAPTLSEVTPMTTSDLESPAASSPTTXXXXXXXXXXXXASARVKNGVGTTGCGDGGAVTTPKRRESAPPAAARSPRDNGGTVETLTSTENAHTVSASPAPPTGYFSADETASLVEKTRDDDKHPERPVSPTAPRLSCSVGHSMSVPSAGGGA----------------------------------GIEGGAAPPXXXXXXXXXXXXXXXXGSAVGEGKTPRRQVEHGVEVGSACLTEVLPDEPAAVTTRAAXXXXXXVREGE-EFETEAQLTVDAPTTGGAGPVKTDRELEMEAAAAMATGQQGLSSQSGGAGQRXXXXXXXXXXXXXXXXXXXSSASLQDFVHYVRVQSGGRGDASLSSPASRSNRRRGGGQGAGAMRSGDAHMSKDKE----------AFSSERIPGTFHRRPLGPVRRSEEMEHPLSSRSSKPQEHHSHQGLEEPAADTALWATAAETPTTALAGVPVYQTHXXXXXXSSRSRRSAQADTVRY----SGSGVSGGKTGVCDAKGGSSGG--RGLLPGSSVLRHRVRRQLFSEDSEARPLVFCPFCGEGVVRAGGLRDHLQECYVLDRCRGSETHKQVEVAIRAVSVEHQMHTSATNTHGKGA-SSLNGGSFQDSSTLLQHALPP---------FVSKGNGPENVLAPAVASENSELGGVVATGGGRGAAAGEVSGVGLEVSLGGGGAGGAEEERCGDCGRTFAPGRLRSHAKACRSVFLERRRPYDPKAMRARGTPLEFFQQPIGAASSDGNPSTSGTGGDGGGTAA--SRRGVG-----RNNPSSVGGSSVRREGSSQSGGADCVSPGELDVSVGTGGGSSRGAGGEVGGSFLRRSKKVALKTLPAVEGSAHCPFCSTSIPRAKLSAHLLRCKKLRRSQTCPRPEA 1251          
BLAST of mRNA_L-elsbetiae_contig1881.5509.1 vs. uniprot
Match: A0A835Z7V0_9STRA (WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7V0_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.240e-16
Identity = 72/205 (35.12%), Postives = 87/205 (42.44%), Query Frame = 0
Query:  805 SVLRHGVRRQLFSENSEAKPLVFCPFCGEGVISPGGLRGHLQVCYVLDRCRGSETHKQVEVAIKAISVEPPRKHSTHAVDAVFSLDNEESFEGSTVLQQAPPASLSQTATSGFGSTGNGPENVLVSEIPRVGGGAGPEASGAGLEFSLGEGEGAVERCEGCGRTFAPGRLQSHAKACRSVFLERRRPYDPRAMRARGTPLEFFQQ 1009
            S +RHG RRQLFSE + A+P V+CP+CGE       L  HL  C VL+R RG    + VE A+ A            A DA  +               AP                            R GGGA             GE     E+C  CGRTFA GR+ +HA+ CR VF  RR  +D R  R RGTPL F Q+
Sbjct:  683 SAVRHGPRRQLFSEGAPAQPSVYCPYCGERE-DAAALAAHLAACVVLERARGGPAQRSVEAALLA------------ARDAADAAXXXXXXXXXXXXXXAPRE-----------------------RFVRSGGGA-----------RSGE-----EQCADCGRTFAEGRIDAHARVCRRVFGARRPVFDGRERRLRGTPLAFMQR 835          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1881.5509.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A6H5KQR3_9PHAE6.040e-11649.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFQ9_ECTSI1.110e-11540.38WW domain-containing protein n=1 Tax=Ectocarpus si... [more]
A0A835Z7V0_9STRA1.240e-1635.12WW domain-containing protein n=1 Tax=Tribonema min... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 149..181
e-value: 0.0029
score: 26.8
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 154..181
score: 10.581
NoneNo IPR availablePFAMPF13913zf-C2HC_2coord: 1192..1213
e-value: 0.011
score: 15.7
coord: 961..982
e-value: 2.9E-6
score: 27.0
NoneNo IPR availableGENE3D2.20.70.10coord: 152..181
e-value: 8.8E-9
score: 36.6
IPR026319Zinc finger C2HC domain-containing proteinPANTHERPTHR13555C2H2 ZINC FINGER CGI-62-RELATEDcoord: 778..1143
coord: 1190..1228
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 153..182

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1881contigL-elsbetiae_contig1881:2875..15283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1881.5509.1mRNA_L-elsbetiae_contig1881.5509.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1881 2109..15337 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1881.5509.1 ID=prot_L-elsbetiae_contig1881.5509.1|Name=mRNA_L-elsbetiae_contig1881.5509.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=1257bp
MGVSPHEPVRIAPMVRRCASADARYDGDLDGRAAGSAESSGHASGGATPS
FSGGRSHDDNGGGGGGGGGGGGGGASTLAAEVVYQRKGSRFVVGRSRERL
SAAACMGGGGGRPGDGGFGAGRGLGAAAPRADGVAAEKGAEMATRLVSVG
HDEWKEACTAEGKIYYYNRRTRVPRWTLPPTATYVPDPERPAGYRIFASA
TAAVSVNKSTATTTTTAAAAASTSGKKAIRKVGVARGTIDKASSSSSSSS
PKACSHALQESGRGGDGASSPPTTLLLSAATPATTMMTTGGTLSSPQSFF
PSGTSGTSAVDNAAARPPAAESESAAAVAATSAMQRFVVHKSGLWASSLR
PTGPSPSASAAAAAATTPPEPKPAPATAAAAAAAPPTITTTDTDNDNDDS
PTASPEQSAEDARPPVPQIDPTGAAATAVASACPAADGARPEPSGPASSS
TPRATATAPGAATAAVAAAAAAGLVGGAHGARLDSGGSRPASTASKPAAG
AAVSPGQEAARDGGAERGAAGSVVVPSPAGATTFTTPAAGRRVRTEEGSR
EPPAVATTGGATAVAADAQRATDSGKRLCGGGGGGGDGGGGQTDERGDER
EEANEEGGLSPSQWSSSSSSSTTLTDFVHTVRVESGGRCDPSAPFPGSRA
AADRAGTSKYIENTGMEDEEEEEEEEEEQVVFSSWRSPGTLRRRPLGPVR
RSDELGYPLPSSRADTCCRSSSGGKKPGPTAVETPKTALAGLPVNQGAGR
SRFDSRLDERSAVAATAAAAAREDGKTVRLARGGGGGGGGGGLGGVRHSG
LPGSSVLRHGVRRQLFSENSEAKPLVFCPFCGEGVISPGGLRGHLQVCYV
LDRCRGSETHKQVEVAIKAISVEPPRKHSTHAVDAVFSLDNEESFEGSTV
LQQAPPASLSQTATSGFGSTGNGPENVLVSEIPRVGGGAGPEASGAGLEF
SLGEGEGAVERCEGCGRTFAPGRLQSHAKACRSVFLERRRPYDPRAMRAR
GTPLEFFQQPIGASTPDGDPSNSGKKGDHGKKASPVARRGVGVGGKKRSP
VGGGGSVVGQGRGAAKAGDGNHVSPGFRGSVGAAKPARGGGGGVAGRTNW
TAAKLPVVEGSAHCPFCSRSVPRAKLSAHLLRCKRPRSAQSAPKPEVRRR
RTYFGSSCVSSIISADETLDNDNSVLGGGGGGGIGNHATRKVRCPHCDRG
FSPSVAPTHISICARVENRPKSATTNPNIAHGAPQKDLGGTRRVQEEKAR
IMPPFY*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR026319ZC2HC1
IPR036020WW_dom_sf