prot_L-elsbetiae_contig1879.5503.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1879.5503.1
Unique Nameprot_L-elsbetiae_contig1879.5503.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length84
Homology
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BLAST of mRNA_L-elsbetiae_contig1879.5503.1 vs. uniprot
Match: A0A6H5KHY4_9PHAE (Thioredoxin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHY4_9PHAE)

HSP 1 Score: 97.1 bits (240), Expect = 7.850e-23
Identity = 43/63 (68.25%), Postives = 53/63 (84.13%), Query Frame = 0 
Query:    1 MAMCFLVGGVGFGITYYINTAVTEWGAEEMVYPVMAMIYVYARNARFFESDDESATKILEGHG 63
            +A+  LVGGVGF  T+Y NT ++EWG +E+ YP+MAMIYVYARNARFFESD+ES+ KIL GHG
Sbjct:   10 VALSLLVGGVGFCTTFYFNTEISEWGKDEIAYPMMAMIYVYARNARFFESDEESSAKILGGHG 72
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1879.5503.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHY4_9PHAE7.850e-2368.25Thioredoxin domain-containing protein n=2 Tax=Ecto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 5..27

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1879contigL-elsbetiae_contig1879:18053..21889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1879.5503.1mRNA_L-elsbetiae_contig1879.5503.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1879 18043..21889 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1879.5503.1 ID=prot_L-elsbetiae_contig1879.5503.1|Name=mRNA_L-elsbetiae_contig1879.5503.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=84bp
MAMCFLVGGVGFGITYYINTAVTEWGAEEMVYPVMAMIYVYARNARFFES
DDESATKILEGHGQTTADSSKGSSRHGGASGNDG
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