prot_L-elsbetiae_contig1869.5464.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1869.5464.1
Unique Nameprot_L-elsbetiae_contig1869.5464.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length320
Homology
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BLAST of mRNA_L-elsbetiae_contig1869.5464.1 vs. uniprot
Match: D7FW69_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW69_ECTSI)

HSP 1 Score: 451 bits (1161), Expect = 1.390e-157
Identity = 238/317 (75.08%), Postives = 261/317 (82.33%), Query Frame = 0 
Query:    1 MKLTAGLSLF-LPAVYAFQTVPSFGVSRVGRHAPTTPFSMHAATDELVPLPVNPSAGDLSRTVSFSPSGLEDLKLVESVLQEDQVGKACVLVIPSWRHHLVQYDCLSACLEALKIPTTVQPLPDGLWAFLLQRLQVHSLRKAARKGVLEDLIAHALLRPFDYLDLALRKHSDRNHGRRITVIAPDDSAWLVRAFVNSRSTEWLKEVPLDTAVFVGGYHKSIVGELALDVFPNRPRASGSSPLLEPEGRSVRFFSLNDRKGGRVEEDGDAVGLEASISCMSFEEDTESCILQEYQVESSGWLSLLGSTSLLSLWVPRV 316
            MKLT G++ F L  VYAFQ  P  G+ + G    T      A+TD  V LPVNPSAG  SRTVSFSPS LEDL++VE +LQ+DQVG+ACVL+IPSWRHH VQYDCLSACLEALKIPT VQPLPDGLWA LLQRLQVHSLRKAARKGVLE LI HAL RPF++LDLALR HSDRN GRRITVIA DDSAWLVRAFVNSRS +W KEVPLDTAV VGGYHKSIVG+LALDVFPN P      P   P+GR V+FFSLN R+GGRV+ +GD + LEASISCMSFEED+ESCILQEY+VE SGWLSLLGSTSLLSLWVPRV
Sbjct:    1 MKLTVGVASFSLTVVYAFQARP-LGIPQGGGRRSTAAL---ASTDGWVALPVNPSAGGRSRTVSFSPSNLEDLQVVEKILQQDQVGEACVLIIPSWRHHPVQYDCLSACLEALKIPTAVQPLPDGLWALLLQRLQVHSLRKAARKGVLEQLIVHALHRPFNHLDLALRLHSDRNTGRRITVIASDDSAWLVRAFVNSRSQQWRKEVPLDTAVLVGGYHKSIVGDLALDVFPNPP------PSPPPDGRVVKFFSLNGREGGRVDGNGD-IDLEASISCMSFEEDSESCILQEYEVEHSGWLSLLGSTSLLSLWVPRV 306
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1869.5464.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FW69_ECTSI1.390e-15775.08Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 17..319
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..16
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.74

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1869contigL-elsbetiae_contig1869:2333..5152 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1869.5464.1mRNA_L-elsbetiae_contig1869.5464.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1869 2333..5792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1869.5464.1 ID=prot_L-elsbetiae_contig1869.5464.1|Name=mRNA_L-elsbetiae_contig1869.5464.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=320bp
MKLTAGLSLFLPAVYAFQTVPSFGVSRVGRHAPTTPFSMHAATDELVPLP
VNPSAGDLSRTVSFSPSGLEDLKLVESVLQEDQVGKACVLVIPSWRHHLV
QYDCLSACLEALKIPTTVQPLPDGLWAFLLQRLQVHSLRKAARKGVLEDL
IAHALLRPFDYLDLALRKHSDRNHGRRITVIAPDDSAWLVRAFVNSRSTE
WLKEVPLDTAVFVGGYHKSIVGELALDVFPNRPRASGSSPLLEPEGRSVR
FFSLNDRKGGRVEEDGDAVGLEASISCMSFEEDTESCILQEYQVESSGWL
SLLGSTSLLSLWVPRVFGG*
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