prot_L-elsbetiae_contig1861.5441.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1861.5441.1
Unique Nameprot_L-elsbetiae_contig1861.5441.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length568
Homology
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: D7FIT8_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIT8_ECTSI)

HSP 1 Score: 97.4 bits (241), Expect = 3.600e-18
Identity = 51/80 (63.75%), Postives = 57/80 (71.25%), Query Frame = 0
Query:  489 RPGS-RLSAFFSCSVSGSSEGKKPPACPRRRRRGSSVACPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            RPGS RL +    S + +  G   PAC R  R GSSVACPVCL+ FQ QD VTL+TCGHAFH  C+E WLERSARCPCCR
Sbjct:  295 RPGSLRLLSDKRLSEARNRRGGMFPAC-RPPRGGSSVACPVCLEAFQAQDVVTLVTCGHAFHRSCIERWLERSARCPCCR 373          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A1U8HH90_CAPAN (E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Capsicum annuum TaxID=4072 RepID=A0A1U8HH90_CAPAN)

HSP 1 Score: 64.3 bits (155), Expect = 3.620e-8
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0
Query:  526 CPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            C +CLD F+  D +T LTC H FH KC+ PWLE +A CPCCR
Sbjct:  147 CAICLDQFKICDNLTQLTCAHKFHSKCLVPWLEANAHCPCCR 188          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A6A6MA44_HEVBR (RING-type domain-containing protein n=2 Tax=Hevea brasiliensis TaxID=3981 RepID=A0A6A6MA44_HEVBR)

HSP 1 Score: 63.2 bits (152), Expect = 9.160e-8
Identity = 21/42 (50.00%), Postives = 29/42 (69.05%), Query Frame = 0
Query:  526 CPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            C +CL+ F+  + +  L C H FHW+C+ PWLE +A CPCCR
Sbjct:  149 CTICLERFKSGETLAHLPCAHRFHWRCLVPWLENNAHCPCCR 190          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A2K5MHY5_CERAT (Ring finger protein 13 n=23 Tax=Eutheria TaxID=9347 RepID=A0A2K5MHY5_CERAT)

HSP 1 Score: 63.9 bits (154), Expect = 9.740e-8
Identity = 25/56 (44.64%), Postives = 37/56 (66.07%), Query Frame = 0
Query:  514 CPRRRRRGSSV-ACPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSAR-CPCCR 567
            CPR R RG     C +CLD +++ D + +L C HA+H KCV+PWL ++ + CP C+
Sbjct:   88 CPRNRHRGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCK 143          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A6P8XV44_DROAB (peroxisome biogenesis factor 10-like isoform X1 n=2 Tax=Drosophila albomicans TaxID=7291 RepID=A0A6P8XV44_DROAB)

HSP 1 Score: 60.8 bits (146), Expect = 1.130e-7
Identity = 23/46 (50.00%), Postives = 30/46 (65.22%), Query Frame = 0
Query:  522 SSVACPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            S V C +CL+ ++  D +   TCGH FHWKC+E W E S +CP CR
Sbjct:   38 SKVNCTICLESYRSVDNIWGGTCGHVFHWKCLERWKENSEQCPTCR 83          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A1U8ARR8_NELNU (probable E3 ubiquitin-protein ligase RHY1A n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8ARR8_NELNU)

HSP 1 Score: 62.8 bits (151), Expect = 1.160e-7
Identity = 23/42 (54.76%), Postives = 30/42 (71.43%), Query Frame = 0
Query:  526 CPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            C VCL+ F+  +A+  L CGH FH +C+ PWLE +A CPCCR
Sbjct:  149 CTVCLEQFKSGEALVQLPCGHRFHSRCLVPWLENNAHCPCCR 190          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A210QL05_MIZYE (E3 ubiquitin-protein ligase n=1 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210QL05_MIZYE)

HSP 1 Score: 61.6 bits (148), Expect = 1.160e-7
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:  526 CPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            CPVCL +F E+D +  + CGH FH KC+ PWLE+   CP CR
Sbjct:   72 CPVCLGLFDEEDELREMPCGHKFHSKCILPWLEKVNSCPLCR 113          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: UPI000B45CA24 (E3 ubiquitin-protein ligase RNF181-like n=2 Tax=Pectinidae TaxID=6566 RepID=UPI000B45CA24)

HSP 1 Score: 61.6 bits (148), Expect = 1.350e-7
Identity = 23/42 (54.76%), Postives = 29/42 (69.05%), Query Frame = 0
Query:  526 CPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            CPVCL +F E+D +  + CGH FH KC+ PWLE+   CP CR
Sbjct:   79 CPVCLGLFDEEDELREMPCGHKFHSKCILPWLEKVNSCPLCR 120          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A3Q7I0G4_SOLLC (RING-type domain-containing protein n=6 Tax=Solanum TaxID=4107 RepID=A0A3Q7I0G4_SOLLC)

HSP 1 Score: 62.4 bits (150), Expect = 1.650e-7
Identity = 24/42 (57.14%), Postives = 29/42 (69.05%), Query Frame = 0
Query:  526 CPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            C +CLD F+  D +  LTC H FH KC+ PWLE +A CPCCR
Sbjct:  147 CSICLDQFKISDNLMQLTCAHKFHSKCLVPWLEFNAHCPCCR 188          
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Match: A0A0M5JDG4_DROBS (CG4325 n=1 Tax=Drosophila busckii TaxID=30019 RepID=A0A0M5JDG4_DROBS)

HSP 1 Score: 60.5 bits (145), Expect = 2.190e-7
Identity = 20/50 (40.00%), Postives = 31/50 (62.00%), Query Frame = 0
Query:  518 RRRGSSVACPVCLDVFQEQDAVTLLTCGHAFHWKCVEPWLERSARCPCCR 567
            R   + V+C +C + ++E D +   TCGH FHW C++ W E + +CP CR
Sbjct:   15 RNNNNRVSCTICSEQYKEADNIYAGTCGHVFHWSCLQRWFEEARKCPICR 64          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1861.5441.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIT8_ECTSI3.600e-1863.75RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A1U8HH90_CAPAN3.620e-859.52E3 ubiquitin-protein ligase RLIM-like n=1 Tax=Caps... [more]
A0A6A6MA44_HEVBR9.160e-850.00RING-type domain-containing protein n=2 Tax=Hevea ... [more]
A0A2K5MHY5_CERAT9.740e-844.64Ring finger protein 13 n=23 Tax=Eutheria TaxID=934... [more]
A0A6P8XV44_DROAB1.130e-750.00peroxisome biogenesis factor 10-like isoform X1 n=... [more]
A0A1U8ARR8_NELNU1.160e-754.76probable E3 ubiquitin-protein ligase RHY1A n=1 Tax... [more]
A0A210QL05_MIZYE1.160e-754.76E3 ubiquitin-protein ligase n=1 Tax=Mizuhopecten y... [more]
UPI000B45CA241.350e-754.76E3 ubiquitin-protein ligase RNF181-like n=2 Tax=Pe... [more]
A0A3Q7I0G4_SOLLC1.650e-757.14RING-type domain-containing protein n=6 Tax=Solanu... [more]
A0A0M5JDG4_DROBS2.190e-740.00CG4325 n=1 Tax=Drosophila busckii TaxID=30019 RepI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 343..363
NoneNo IPR availablePANTHERPTHR45676FAMILY NOT NAMEDcoord: 378..567
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 522..567
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 526..566
e-value: 5.1E-8
score: 42.6
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 526..567
e-value: 2.2E-12
score: 47.1
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 526..567
score: 13.374
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 521..567
e-value: 1.3E-14
score: 55.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1861contigL-elsbetiae_contig1861:1132..5428 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1861.5441.1mRNA_L-elsbetiae_contig1861.5441.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1861 1132..5428 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1861.5441.1 ID=prot_L-elsbetiae_contig1861.5441.1|Name=mRNA_L-elsbetiae_contig1861.5441.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=568bp
MQMTLGFLRAVYLTRGGFYADDEYEEDDRYEHPGGRWGFQRQQEADLEAG
RGRRGQRRRSEEGEEEEEEDLEGLFWDVELVFPARRQNRTVFDSSNSTAV
ADAAAGTPPDVSAGSVRRRFRLFELLFRRDAPAAALPPQTADLPEGRNSA
EQRGERGSGMGVGMGGGQRVGALDPLTRKSFIHFVATAGDGFVPPTAGKA
AAEVAAPFATTTPSAKVAACSGDQEGEEAGEPRLRPPDGRPREQLSGSSR
SQQPCREETKSVHFGERSPSPSSPTSSPGTARLEGGSSPRRTGARSCPRH
RRETRARGNAGGEPDASAPGGCVAEGQERGASPTQVEPRLGLREEEQEEE
GEEEGEKDDEEEKGEGGGERAATPVGGGRESSGERVLARGRDAPGADGEE
EEEEVKDGGMQGLTQVVESVIEARLATGATGGDESLGGTTAATAPGAPTE
AGAAGVTPETPASAGVRVCSGGGAEVSGGDVIATAADRRPGSRLSAFFSC
SVSGSSEGKKPPACPRRRRRGSSVACPVCLDVFQEQDAVTLLTCGHAFHW
KCVEPWLERSARCPCCR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD