prot_L-elsbetiae_contig18224.5267.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig18224.5267.1
Unique Nameprot_L-elsbetiae_contig18224.5267.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length382
Homology
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Match: A0A6H5KDB3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDB3_9PHAE)

HSP 1 Score: 278 bits (711), Expect = 1.660e-86
Identity = 170/373 (45.58%), Postives = 216/373 (57.91%), Query Frame = 0
Query:   39 MDTLPTIVLSSIASFARGGKLSGACRSTLEAIPELHYKISIMDRAESFSIGEDPDGALSSA-----HMGLQPSGALATGRMVTRVTVTGCTDNKDTKGGYQILEKVIQRVVEHSIPTLRSITVTGY-----RGKDSG-----------------------RVAAIIGALVPASAKRHRTAPRLARVELRHGANGVVKAGKAIGAGLWPALEELIVPNCHGNKGHFSGLSSALRSGRAPNLRVLNWDNQACSKE-GVDDSVLWALCAGKCPRVGRLSFTDSFWLSELRLDSLRGALQACPKLRELRMDCTRDPGKQLRDLTAALQAGDVPCLRSVLLRKSS--YRVVVPSTEEEVNALKRAAASRAPPIRLDVK 375
            +D LP +VL  I SF     LSG CR+TL  I ELHYK+ +   A ++  G       S       HMG+  SGALATGR V R+T+T   + +D       LE+ I+RVV+HSIPTLR IT+ GY     R + SG                          AI+G LVP SAKRHR APRLARV L  GA GV KAG+A+  GLWPALE L   +C  N GHF  L+  LRSG AP LRVL WD+Q+  ++  VDD +L AL  G+CP V  LSFT + +  E R+  L   L  CP+LRELRMDC+R P  +LR L  AL  G VP L  +L+R ++  YR     ++ E+ ALKR AASR+PP+ L+++
Sbjct:   79 LDVLPGVVLREIVSFTTDSSLSGVCRTTLGGIRELHYKVDMAKVASAYFFGRLAAAYCSKTLELTDHMGIDASGALATGRAVVRITITHVHETQDPA-----LEQAIRRVVQHSIPTLREITIRGYPTWTGRARPSGGSCSIQYPPCARSPSAGAPHGPDAPGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVATGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSIRDVAVDDVILNALSWGQCPLVEHLSFTGNRFCPEHRITYLEEMLWVCPRLRELRMDCSRTPHHELRVLAGALAGGHVPRLERLLVRATAPYYR----DSDVELRALKRVAASRSPPVELELQ 442          
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Match: D8LAY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAY2_ECTSI)

HSP 1 Score: 264 bits (675), Expect = 5.400e-83
Identity = 154/298 (51.68%), Postives = 196/298 (65.77%), Query Frame = 0
Query:   87 SIGEDPDGALSSAHMGLQPSGALATGRMVTRVTVTGCTDNKDTK---GGYQILEKVIQRVVEHSIPTLRSITVTG---YRGKDSGRVAAIIGALVPASAKRHRTAPRLARVELRHGANGVVKAGKAIGAGLWPALEELIVPNCHGNKGHFSGLSSALRSGRAPNLRVLNWDNQACSKEG-VDDSVLWALCAGKCPRVGRLSFTDSFWLSELRLDSLRGALQACPKLRELRMDCTRDPGKQLRDLTAALQAGDVPCLRSVLLRKSS--YRVVVPSTEEEVNALKRAAASRAPPIRLDVK 375
            S G DP GA  + HMGL+ SGALATGR + R+T+T   ++ +       Y+ LE+ + RVV HSIPTLR IT+ G   + G+   RV AI+G LVP SAKRHR APRL+RV L  GA GV KAG+A+ AGLWPALE L   +C  N GHF  L+  LRSG AP LRVL WD+Q+  ++  VDD +L AL  GKCP V RLSFT + +  E  +  L  AL  CP+LRELRMDC+R P  QLR L  AL  G VP L  +L+R ++  YR     ++ E+ ALKRAAASR+PP+ L+++
Sbjct:    8 SPGADPAGADLANHMGLEASGALATGRAIVRITITTVFESANESRHHARYKALEQAVGRVVRHSIPTLREITIRGCPTWNGR--ARVGAILGELVPLSAKRHRVAPRLSRVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDASVDDVILGALSWGKCPLVERLSFTGNRFCPEHSIGYLEEALWVCPRLRELRMDCSRTPHHQLRVLVGALVGGHVPRLERLLVRATAPYYR----DSDVELLALKRAAASRSPPVELELQ 299          
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Match: D7FWR8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR8_ECTSI)

HSP 1 Score: 262 bits (670), Expect = 2.780e-82
Identity = 154/294 (52.38%), Postives = 191/294 (64.97%), Query Frame = 0
Query:   86 FSIGEDPDGALSSAHMGLQPSGALATGRMVTRVTVTGCTDNKDTKGGYQILEKVIQRVVEHSIPTLRSITVTGY-RGKDSGRVAAIIGALVPASAKRHRTAPRLARVELRHGANGVVKAGKAIGAGLWPALEELIVPNCHGNKGHFSGLSSALRSGRAPNLRVLNWDNQACSKE-GVDDSVLWALCAGKCPRVGRLSFTDSFWLSELRLDSLRGALQACPKLRELRMDCTRDPGKQLRDLTAALQAGDVPCLRSVLLRKSS--YRVVVPSTEEEVNALKRAAASRAPPIRLDVK 375
            +S  EDP GA  + HMGL  SGALATGR V R+T+T     +D       LE+ I+RVV+HSIPTLR I + GY       RV AI+G LVP SAKRHR APRLARV L  GA GV KAG+A+ AGLWPALE L   +C  N GHF  L+  LRSG AP LRVL WD+Q+  ++  VDD +L AL  G+CP V RLSFT + +  E R+  L   L  CP+LRELRMDC+R P  QL  L  AL  G VP L  +L+R ++  YR     ++ E+ ALKRAAASR+PP+ L+++
Sbjct:   11 YSPSEDPTGAELTNHMGLDASGALATGRAVVRITITYVHHFQDPA-----LEQAIRRVVQHSIPTLREIAIRGYPTWTGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYR----DSDVELLALKRAAASRSPPVELELQ 295          
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Match: D7FWR9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWR9_ECTSI)

HSP 1 Score: 254 bits (649), Expect = 2.140e-76
Identity = 175/424 (41.27%), Postives = 218/424 (51.42%), Query Frame = 0
Query:   39 MDTLPTIVLSSIASFARGGKLSGACRSTLEAIPELHYKISIMDRAESFSIGEDPDGALSSAHMGLQPSGALATGRMVTRVTVTGCTDNKDTKGGYQILEKVIQRVVEHSIPTLRSITVTGY----------------------------------------------------------------------------RGKDSGR--------VAAIIGALVPASAKRHRTAPRLARVELRHGANGVVKAGKAIGAGLWPALEELIVPNCHGNKGHFSGLSSALRSGRAPNLRVLNWDNQACSKE-GVDDSVLWALCAGKCPRVGRLSFTDSFWLSELRLDSLRGALQACPKLRELRMDCTRDPGKQLRDLTAALQAGDVPCLRSVLLRKSS--YRVVVPSTEEEVNALKRAAASRAPPIRLDVK 375
            +D LP +VL  I SF     LSG CR+TL AI ELHYKI  M++  S    +  +    + HMGL  SGALATGR V R+T+T     +D       LE+ I+RVV+HSIPTLR I +  Y                                                                            RG  SG         V AI+G LVP SAKRHR APRLARV L  GA GV KAG+A+ AGLWPALE L   +C  N GHF  L+  LRSG AP LRVL WD+Q+  ++  VDD +L AL  G+CP V RLSFT + +  E R+  L   L  CP+LRELRMDC+R P  QL  L  AL  G VP L  +L+R ++  YR     ++ E+ ALKRAAASR+PP+ L+++
Sbjct:  106 LDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKID-MNKVSSAHYLKRSE---LTNHMGLDASGALATGRAVVRITITHVLHAQDPA-----LEQAIRRVVQHSIPTLREIAIRRYPTWNGRARVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGVGAILGELVPLSAKRHRVAPRLARVHLVDGATGVAKAGRAVAAGLWPALEVLTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSSVRDVAVDDVILGALSWGQCPLVERLSFTGNRFCPEHRIRYLEEMLWVCPRLRELRMDCSRTPHHQLSVLAGALAGGHVPRLERLLVRATARYYR----DSDVELLALKRAAASRSPPVELELQ 516          
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Match: A0A6H5KU71_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU71_9PHAE)

HSP 1 Score: 180 bits (456), Expect = 3.270e-51
Identity = 108/213 (50.70%), Postives = 134/213 (62.91%), Query Frame = 0
Query:  166 RVAAIIGALVPASAKRHRTAPRLARVELRHGANGVVKAGKAIGAGLWPALEELIVPNCHGNKGHFSGLSSALRSGRAPNLRVLNWDNQACSKEG-VDDSVLWALCAGKCPRVGRLSFTDSFWLSELRLDSLRGALQACPKLRELRMDCTRDPGKQLRDLTAALQAGDVPCLRSVLLRKSS--YRVVVPSTEEEVNALKRAAASRAPPIRLDVK 375
            RV AI G LVP SAKRHR A RLARV L  GA G  KAGKA+ AGL PALE     +C  N GHF  L+  LRSG AP LRVL WD+Q+  ++  +DD +L AL  G CP V RLSFT + +  E  +  L      CP+LRELRMDC+R P  QLR L  AL    VP L  +L+R ++  YR     ++ E+ ALK AAASR+PP+ L+++
Sbjct:   13 RVGAIRGELVPLSAKRHRVARRLARVHLVDGATGAAKAGKAVAAGLRPALEVPTFSHCRANAGHFRDLARGLRSGLAPRLRVLGWDDQSTIRDAALDDVILGALSWGHCPLVERLSFTGTRFCPEHSIRYLEEMFWVCPRLRELRMDCSRTPHHQLRVLAGALAGEHVPRLERLLVRATAPYYR----DSDVELLALKLAAASRSPPVALELQ 221          
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Match: A0A6H5KEB8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEB8_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 6.720e-12
Identity = 42/83 (50.60%), Postives = 50/83 (60.24%), Query Frame = 0
Query:   39 MDTLPTIVLSSIASFARGGKLSGACRSTLEAIPELHYKISIMDRAESFSIGEDPDGALSSAHMGLQPSGALATGRMVTRVTVT 121
            +D LP +VL  I SF     LSG CR+TL AI ELHYK+++          ED  GA    HMGL  SGALATGR V R+T+T
Sbjct:   68 LDVLPGVVLREIVSFTTDSSLSGVCRTTLGAIRELHYKVNMT---------EDVVGAEIKHHMGLDASGALATGRDVVRITIT 141          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig18224.5267.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A6H5KDB3_9PHAE1.660e-8645.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LAY2_ECTSI5.400e-8351.68Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
D7FWR8_ECTSI2.780e-8252.38Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FWR9_ECTSI2.140e-7641.27Uncharacterized protein n=2 Tax=Ectocarpus silicul... [more]
A0A6H5KU71_9PHAE3.270e-5150.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KEB8_9PHAE6.720e-1250.60Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 210..346
e-value: 3.4E-7
score: 31.3
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 212..341

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig18224contigL-elsbetiae_contig18224:700..2351 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig18224.5267.1mRNA_L-elsbetiae_contig18224.5267.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig18224 700..2599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig18224.5267.1 ID=prot_L-elsbetiae_contig18224.5267.1|Name=mRNA_L-elsbetiae_contig18224.5267.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=382bp
MNPHHHHVDKRARGDSNNLNEILGSPPSAAAAAPATITMDTLPTIVLSSI
ASFARGGKLSGACRSTLEAIPELHYKISIMDRAESFSIGEDPDGALSSAH
MGLQPSGALATGRMVTRVTVTGCTDNKDTKGGYQILEKVIQRVVEHSIPT
LRSITVTGYRGKDSGRVAAIIGALVPASAKRHRTAPRLARVELRHGANGV
VKAGKAIGAGLWPALEELIVPNCHGNKGHFSGLSSALRSGRAPNLRVLNW
DNQACSKEGVDDSVLWALCAGKCPRVGRLSFTDSFWLSELRLDSLRGALQ
ACPKLRELRMDCTRDPGKQLRDLTAALQAGDVPCLRSVLLRKSSYRVVVP
STEEEVNALKRAAASRAPPIRLDVKSVPGLW*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf