prot_L-elsbetiae_contig180.5163.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig180.5163.1
Unique Nameprot_L-elsbetiae_contig180.5163.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length64
Homology
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BLAST of mRNA_L-elsbetiae_contig180.5163.1 vs. uniprot
Match: A0A6H5KKU0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKU0_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 1.840e-12
Identity = 47/56 (83.93%), Postives = 47/56 (83.93%), Query Frame = 0 
Query:    8 SGSDDLNRSGGGTSSDDDEVSLNDSDDTGSLIDEDDESTEDHQASRSYSDSNDDNF 63
            SGSDDLNRSG        EVSLNDSDDTGSLIDEDDESTED QASRSYSDSNDDNF
Sbjct:  205 SGSDDLNRSGXXXXXXXXEVSLNDSDDTGSLIDEDDESTED-QASRSYSDSNDDNF 259
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BLAST of mRNA_L-elsbetiae_contig180.5163.1 vs. uniprot
Match: D8LND8_ECTSI (Putative: flagellar associated protein, qilin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LND8_ECTSI)

HSP 1 Score: 59.7 bits (143), Expect = 6.270e-9
Identity = 36/38 (94.74%), Postives = 37/38 (97.37%), Query Frame = 0 
Query:   26 EVSLNDSDDTGSLIDEDDESTEDHQASRSYSDSNDDNF 63
            +VSLNDSDDTGSLIDEDDESTED QASRSYSDSNDDNF
Sbjct:  269 QVSLNDSDDTGSLIDEDDESTED-QASRSYSDSNDDNF 305
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig180.5163.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KKU0_9PHAE1.840e-1283.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LND8_ECTSI6.270e-994.74Putative: flagellar associated protein, qilin-like... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig180contigL-elsbetiae_contig180:45114..46190 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig180.5163.1mRNA_L-elsbetiae_contig180.5163.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig180 44552..46261 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig180.5163.1 ID=prot_L-elsbetiae_contig180.5163.1|Name=mRNA_L-elsbetiae_contig180.5163.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=64bp
MSGSGSGSGSDDLNRSGGGTSSDDDEVSLNDSDDTGSLIDEDDESTEDHQ
ASRSYSDSNDDNF*
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