prot_L-elsbetiae_contig17923.5123.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17923.5123.1
Unique Nameprot_L-elsbetiae_contig17923.5123.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length298
Homology
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BLAST of mRNA_L-elsbetiae_contig17923.5123.1 vs. uniprot
Match: D8LGY8_ECTSI (LisH domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGY8_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 6.880e-85
Identity = 234/324 (72.22%), Postives = 251/324 (77.47%), Query Frame = 0 
Query:    8 SLVVDHLASNGLLQSLAVFLPESGLG------------TDAGASVAA-AALSREDVLQALSLPADSALFRRVISRAAE-EG--------ADGRAA--PGAGAGATVVLTASAAVLPAEXXXXXXXXXXXXXXXXXXXXXXXXXKRVCGLLEALVGEVAARSRAVAVDCNTQTEEAGRSHKENLVSRLEAVRETWLKRSADERREPAQDVTERMLAYQRECESRAATQAKL---------AERETFRERDLAALRLQMTSAQRREVDATRKELQSQYDARVERLRESEREXXXXXXXXXXXXXVXXXXXXQSLLREMDLLRTREQ 298
            SLVVDHLASNGLLQSLAVFLPESGLG            T  GA+ AA AALSREDVLQAL +PADS LFRRVI RA E EG        +DG  A  PGA AGA   + ++A+V     XXXXXXXXXXXXXXXXXXXX    KRVCGLLEALVGEVA RSRAVAVD NTQT+EAGRSHKENLV+RLEAVRETWL+RSADERREPAQDVTERMLAYQRECESRAA QA           AER++FRERDLAALR+QM S +RREVDA RKELQSQYDARVERL+E+ER+  XXXXXXXXXXX XXXXXX      MDLLRTREQ
Sbjct:  120 SLVVDHLASNGLLQSLAVFLPESGLGGGSNCGNTATVGTGPGAAPAAEAALSREDVLQALPIPADSNLFRRVIRRAEEGEGKAAGSVCRSDGETAAVPGAAAGADTAVVSNASVA---VXXXXXXXXXXXXXXXXXXXXSREQKRVCGLLEALVGEVATRSRAVAVDSNTQTDEAGRSHKENLVTRLEAVRETWLRRSADERREPAQDVTERMLAYQRECESRAAAQASCWVAPRLLIKAERDSFRERDLAALRVQMASTRRREVDAMRKELQSQYDARVERLQETERDREXXXXXXXXXXXXXXXXXXXXXXXXMDLLRTREQ 440
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BLAST of mRNA_L-elsbetiae_contig17923.5123.1 vs. uniprot
Match: A0A7S1U379_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U379_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 2.370e-7
Identity = 49/145 (33.79%), Postives = 73/145 (50.34%), Query Frame = 0 
Query:  153 TQTEEAGRSHKENLVSRLEAVRETWLKRSADERREPAQDVTERMLAYQRECESRAATQAKLAERETFRERDLAALRLQMTSAQRREVDATRKELQSQYDARVERLRESEREXXXXXXXXXXXXXVXXXXXXQSLLREMDLLRTRE 297
            TQTE    + ++ L ++LE +   +   SA    E  Q + +RM  +QRE   RAA   + AE++ F E +L+  RL+    QRREVD  R+ELQ+ YD R++ L   + E                    Q+LL E++ LR RE
Sbjct:   64 TQTETTAWNARDALTAQLEHLEARFASTSARLLSEDGQGIEQRMATFQREVVERAARDLE-AEKQRFVETELSRARLEFQQLQRREVDTLRRELQADYDRRLQELHARDAERALRAEASARNIEASQHDARQNLLFEIERLRNRE 207
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17923.5123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LGY8_ECTSI6.880e-8572.22LisH domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S1U379_9STRA2.370e-733.79Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 243..263
NoneNo IPR availablePANTHERPTHR39063FAMILY NOT NAMEDcoord: 121..298
coord: 7..69
IPR006594LIS1 homology motifPFAMPF16045LisH_2coord: 8..33
e-value: 9.6E-10
score: 37.3
IPR006594LIS1 homology motifPROSITEPS50896LISHcoord: 2..34
score: 7.564

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17923contigL-elsbetiae_contig17923:56..2766 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17923.5123.1mRNA_L-elsbetiae_contig17923.5123.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17923 56..2766 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17923.5123.1 ID=prot_L-elsbetiae_contig17923.5123.1|Name=mRNA_L-elsbetiae_contig17923.5123.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=298bp
MNVACFVSLVVDHLASNGLLQSLAVFLPESGLGTDAGASVAAAALSREDV
LQALSLPADSALFRRVISRAAEEGADGRAAPGAGAGATVVLTASAAVLPA
EAGGGGGGGAATAAGGSSQQQQQQQQKRVCGLLEALVGEVAARSRAVAVD
CNTQTEEAGRSHKENLVSRLEAVRETWLKRSADERREPAQDVTERMLAYQ
RECESRAATQAKLAERETFRERDLAALRLQMTSAQRREVDATRKELQSQY
DARVERLRESERERERRDKERLRDAEVSQFEARQSLLREMDLLRTREQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006594LisH