prot_L-elsbetiae_contig17920.5121.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17920.5121.1
Unique Nameprot_L-elsbetiae_contig17920.5121.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17920.5121.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..37
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 58..68
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 69..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 38..57
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..157
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..22
score: 0.531
NoneNo IPR availableTMHMMTMhelixcoord: 69..91
NoneNo IPR availableTMHMMTMhelixcoord: 3..25
NoneNo IPR availableTMHMMTMhelixcoord: 106..128
NoneNo IPR availableTMHMMTMhelixcoord: 35..57

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17920contigL-elsbetiae_contig17920:1259..1732 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17920.5121.1mRNA_L-elsbetiae_contig17920.5121.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17920 1025..1813 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17920.5121.1 ID=prot_L-elsbetiae_contig17920.5121.1|Name=mRNA_L-elsbetiae_contig17920.5121.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MSFAVAAVFVASSATHLPLAAALHTDEITDNNVRLPVFAVAIAAAAAAAA
AAITGVVTIPNFADTKAAVAASAIVAAAIAIANAIAIATPAGLLTPTDQT
KSIPTVAMRPTGGSLAVAPSFYDSFFAGRRNKRGWISRPRNKMRWLVSPG
TTATCSS*
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