prot_L-elsbetiae_contig17893.5107.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17893.5107.1
Unique Nameprot_L-elsbetiae_contig17893.5107.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length114
Homology
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BLAST of mRNA_L-elsbetiae_contig17893.5107.1 vs. uniprot
Match: D8LTP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP0_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.080e-8
Identity = 57/113 (50.44%), Postives = 73/113 (64.60%), Query Frame = 0 
Query:    6 EQGSSTAGSKQAGILSSVTRAA----LRGRTATLGAFNRSSPSRTDSSSSSPKPPGSSGGKPEGRNLSFGSLSGISSSASSALRGLAAGVGVVGXXXXXXXXXXXXXXTTNSE 114
            EQG+ ++G  + GI+SSV+RAA    LRGR+ATL A +         SS+SP PPG+  G+    +  FGSLSGISS+A+SALRGLA+GV + G       XXXX   TTNSE
Sbjct:   16 EQGTPSSGGSK-GIISSVSRAASSVALRGRSATLNALHIGRGQNRTESSASPLPPGNVKGETASGHHPFGSLSGISSTATSALRGLASGVHL-GAGGNGAGXXXXSGSTTNSE 126
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17893.5107.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LTP0_ECTSI1.080e-850.44Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17893contigL-elsbetiae_contig17893:495..3124 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17893.5107.1mRNA_L-elsbetiae_contig17893.5107.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17893 475..3124 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17893.5107.1 ID=prot_L-elsbetiae_contig17893.5107.1|Name=mRNA_L-elsbetiae_contig17893.5107.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=114bp
MATRTEQGSSTAGSKQAGILSSVTRAALRGRTATLGAFNRSSPSRTDSSS
SSPKPPGSSGGKPEGRNLSFGSLSGISSSASSALRGLAAGVGVVGLGVGG
GGGGGGSGSTTNSE
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