prot_L-elsbetiae_contig1787.5096.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1787.5096.1
Unique Nameprot_L-elsbetiae_contig1787.5096.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length89
Homology
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BLAST of mRNA_L-elsbetiae_contig1787.5096.1 vs. uniprot
Match: D7FZG4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG4_ECTSI)

HSP 1 Score: 147 bits (371), Expect = 9.630e-40
Identity = 71/81 (87.65%), Postives = 76/81 (93.83%), Query Frame = 0 
Query:    9 LSRRGSGSVFVDRVGITRIPDRAWTIALDYLELGEGLRCRQLGRVFRDTVEASLSVLALSGVNTLTWATPENLTFLTRFKN 89
            +SRR SG +F DRVGITRIPDRAWTIALDYLELGEG+RCRQLGR FRDTVEASLSVLALSGVNT+TWATP+NL FLTRFKN
Sbjct:  116 MSRRASGLIFADRVGITRIPDRAWTIALDYLELGEGMRCRQLGRAFRDTVEASLSVLALSGVNTITWATPDNLAFLTRFKN 196
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BLAST of mRNA_L-elsbetiae_contig1787.5096.1 vs. uniprot
Match: A0A6H5L111_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L111_9PHAE)

HSP 1 Score: 68.9 bits (167), Expect = 3.330e-12
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0 
Query:    7 GGLSRRGSGSVFVDRVGITRIPDRAWTIALDYLELGE 43
            G LSRR SGS+F DRVGITRIPDRAWTIALDYLELGE
Sbjct:  182 GVLSRRASGSIFADRVGITRIPDRAWTIALDYLELGE 218
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1787.5096.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FZG4_ECTSI9.630e-4087.65Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L111_9PHAE3.330e-1289.19Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1787contigL-elsbetiae_contig1787:22051..23452 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1787.5096.1mRNA_L-elsbetiae_contig1787.5096.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1787 22051..23454 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1787.5096.1 ID=prot_L-elsbetiae_contig1787.5096.1|Name=mRNA_L-elsbetiae_contig1787.5096.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=89bp
TGSRPGGGLSRRGSGSVFVDRVGITRIPDRAWTIALDYLELGEGLRCRQL
GRVFRDTVEASLSVLALSGVNTLTWATPENLTFLTRFKN
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