prot_L-elsbetiae_contig1785.5086.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1785.5086.1
Unique Nameprot_L-elsbetiae_contig1785.5086.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length617
Homology
BLAST of mRNA_L-elsbetiae_contig1785.5086.1 vs. uniprot
Match: D8LIM5_ECTSI (Radial spoke protein 7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIM5_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 6.850e-93
Identity = 174/227 (76.65%), Postives = 198/227 (87.22%), Query Frame = 0
Query:    1 MALCRDEDAKSDSLGSKAHLKINGDIMAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQAHVVDGMINYVELVPMIAKTVEGMFHPRSLKMRHEIFKNRGSGGXXXXXXXXXXALGEGSSLLQPMGAATTVLGKSREDVQRIFVDVLREDEQGSGIDRLKDPATFSRCIASLGLDLEPDTISALWVAADLDSRHGTTFVDVVDFCFNCVLFMEREKEARV 227
            MALCR+E+AKSD LG+K H+K NGD +AIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQA+++DGM+NY+ELVPMIAKT+EGMFHP SLKMRHEIF N  + G XXXXXXXXX            G AT V GKSR+D+QR  V++LRED+QG+ I+RL+DPATF+RC+ASLGLDLEPDTI+ALWVAADLD+R GTTFVDVVDFCFNCVLFMEREKEARV
Sbjct:  900 MALCREEEAKSDPLGNKGHMKSNGDAVAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQANILDGMVNYIELVPMIAKTIEGMFHPWSLKMRHEIFNN--NRGPXXXXXXXXXXXXXXXXXXXXXGTAT-VRGKSRDDIQRKIVEILREDKQGAAIERLRDPATFARCMASLGLDLEPDTINALWVAADLDTREGTTFVDVVDFCFNCVLFMEREKEARV 1123          
BLAST of mRNA_L-elsbetiae_contig1785.5086.1 vs. uniprot
Match: A0A6H5K287_9PHAE (EF-hand domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K287_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 1.160e-47
Identity = 111/156 (71.15%), Postives = 127/156 (81.41%), Query Frame = 0
Query:    1 MALCRDEDAKSDSLGSKAHLKINGDIMAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQAHVVDGMINYVELVPMIAKTVEGMFHPRSLKMRHEIFKNRGSGGXXXXXXXXXXALGEGSSLLQPMGAATTVLGKSREDVQRIFVDVLRE 156
            MALCR+E+AKSD LG+K H+K NGD +AIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQA+++DGM+NYVELVPMIAKT+EGMFHP S+KMRHEIF N  + G XXXXXXXXX                TV GKSR+D+QR  V++LRE
Sbjct: 1026 MALCREEEAKSDPLGNKGHMKSNGDAVAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQANILDGMVNYVELVPMIAKTIEGMFHPWSIKMRHEIFNN--NRGPXXXXXXXXXXXXXXXXXXXXXXXTATVRGKSRDDIQRKIVEILRE 1179          
BLAST of mRNA_L-elsbetiae_contig1785.5086.1 vs. uniprot
Match: A0A482S1E4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1E4_9ARCH)

HSP 1 Score: 67.8 bits (164), Expect = 2.130e-8
Identity = 39/102 (38.24%), Postives = 63/102 (61.76%), Query Frame = 0
Query:    3 LCRDEDAKSDSLGSKAHLKINGDIMAIGGKHYSGVLRARQLTKLLLNAPLLSLSRLHVTALMSQAHVVDGMINYVELVPMIAKTVEGMFHPRSLKMRHEIFK 104
            LCR+E+A+ +      H + N +         +G++  R L  +L N+  LSLSRL V  +MS+A V+DGMINY + +P++AK +E MF P++L+ R E+ +
Sbjct:   73 LCREEEARLE------HFEGNMEKFVP-----TGIVPCRSLINILSNSSRLSLSRLQVLVIMSEASVLDGMINYFQFIPVVAKAIEIMFEPKALRQRAELIE 163          
BLAST of mRNA_L-elsbetiae_contig1785.5086.1 vs. uniprot
Match: A0A7S0SSP5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SSP5_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 7.660e-7
Identity = 53/199 (26.63%), Postives = 88/199 (44.22%), Query Frame = 0
Query:   35 SGVLRARQLTKLLLNAPLLSLSRLHVTALMSQAHVV-DGMINYVELVPMIAKTVEGMFHPRSLKMRHEIFKNRGSGGXXXXXXXXXXALGEGSSLLQPMGAATTVLGKSREDVQRIFVDVLRE---DEQGSGIDRLKDPATFSRCIASLGLDLEPDTISALWVAADLDSRHGTTFVDVVDFCFNCVLFMEREKEARVMK 229
            +G L  R L  +L NAP LSL+RL V  ++S+A +  DG+INY   VP+I+KT+E MF P +LK R E+ +                +      LL          G ++++ ++  + + +    D+ G       D   F  CI SL L+L    I                    + F  N ++ +E+EK  ++++
Sbjct:   80 AGFLPLRTLINILYNAPRLSLTRLQVLVILSEATISNDGLINYYSFVPIISKTIELMFSPLALKQRAELIET--------------VSFSPSEILLS---------GLNKDEFEKKLMTLFKSYDIDKNG-----YLDEYEFIACIESLELNLTRSEIMVXXXXXXXXXXXXXXXXXXIGFFVNNLIHLEKEKHLKILQ 250          
BLAST of mRNA_L-elsbetiae_contig1785.5086.1 vs. uniprot
Match: A0A7S3UWC3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UWC3_HETAK)

HSP 1 Score: 58.9 bits (141), Expect = 7.720e-6
Identity = 46/176 (26.14%), Postives = 78/176 (44.32%), Query Frame = 0
Query:   36 GVLRARQLTKLLLNAPLLSLSRLHVTALMSQAHVVDGMINYVELVPMIAKTVEGMFHPRSLKMRHEIFKNRGSGGXXXXXXXXXXALGEGSSLLQPMGAATTVLGKSREDVQRIFVDVLREDEQGSGIDRLKDPATFSRCIASLGLDLEPDTISALWVAADLDSRHGTTFVDVVDF 211
            GVL   +  ++L  +  LSL+RL V  LMS A+++DG +NY++ +P+ AKT+EGM+ P   + +  I +   S                               GKS E+ +       +   +G   D + D ++F  C+ S   +L  D I  ++ AAD D     +  + + F
Sbjct:   16 GVLTRTRFAEILQESEKLSLTRLQVITLMSGAYIMDGNLNYLQFLPLAAKTIEGMYDPALFEKKQAIKQKIFS-------------------------------GKSEEEYKAQLKAKFKTYAKG---DDILDASSFQSCVHSFDPNLTKDQIKEMYDAADEDGDETVSVDEFLKF 157          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1785.5086.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LIM5_ECTSI6.850e-9376.65Radial spoke protein 7 n=1 Tax=Ectocarpus siliculo... [more]
A0A6H5K287_9PHAE1.160e-4771.15EF-hand domain-containing protein n=1 Tax=Ectocarp... [more]
A0A482S1E4_9ARCH2.130e-838.24Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S0SSP5_9STRA7.660e-726.63Hypothetical protein (Fragment) n=1 Tax=Chromulina... [more]
A0A7S3UWC3_HETAK7.720e-626.14Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1785contigL-elsbetiae_contig1785:1132..5655 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1785.5086.1mRNA_L-elsbetiae_contig1785.5086.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1785 369..6358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1785.5086.1 ID=prot_L-elsbetiae_contig1785.5086.1|Name=mRNA_L-elsbetiae_contig1785.5086.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=617bp
MALCRDEDAKSDSLGSKAHLKINGDIMAIGGKHYSGVLRARQLTKLLLNA
PLLSLSRLHVTALMSQAHVVDGMINYVELVPMIAKTVEGMFHPRSLKMRH
EIFKNRGSGGGGGGGGVGGGALGEGSSLLQPMGAATTVLGKSREDVQRIF
VDVLREDEQGSGIDRLKDPATFSRCIASLGLDLEPDTISALWVAADLDSR
HGTTFVDVVDFCFNCVLFMEREKEARVMKGMQRTHNTATRASQAGRAAPG
AAAVARAEAVAAAALAAGETPAGKVEPLLSLARALVRHAKVTDISEGKVG
LEFPLDRHFSSSSGGGSTIPGDSAASSIEENSRGSKQRCTDDGDPAVAPD
AAKTESSLTGTGEENADSLGGGGEGAGTTAEGGEGATGALQLRSEAPGAT
ILLRARRNMPVVSSSGQRIMAVSPKSSPLPSGGAAWAAATTTTTTTTTTT
TDPSVEAQTATQGDDGPPLPPPGQPRSMAEGQRGSGGGLETAEAAAARGE
TRDVVVQVYWNGAARDRAHVEVFPADRDRGWGGPGDEGEQRHPLLRLGVR
VPTLAVVDAQAAEKFAERVVQQIAIQLDDEKVRAGGKRGGADQQQQQWGQ
KLRLAGVDAKSVVTGN*
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