prot_L-elsbetiae_contig1758.4957.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1758.4957.1
Unique Nameprot_L-elsbetiae_contig1758.4957.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length72
Homology
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: D8LAZ7_ECTSI (Transcription initiation factor TFIID subunit n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ7_ECTSI)

HSP 1 Score: 125 bits (315), Expect = 5.460e-35
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTRE 69
            LLKDAGVTSYEPRVV+HLVDRMRRYT EV+ DARDYADHAGR D+GM DVRLAVRKKQDALSAGPP+RE
Sbjct:    3 LLKDAGVTSYEPRVVSHLVDRMRRYTREVLIDARDYADHAGRTDLGMQDVRLAVRKKQDALSAGPPSRE 71          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: A0A8B7Y458_ACAPL (transcription initiation factor TFIID subunit 9-like n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7Y458_ACAPL)

HSP 1 Score: 73.9 bits (180), Expect = 3.100e-14
Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTRE 69
            +LKD G+T YEPR+VN +++   RY  +V++DA+ Y+ HAGR +I  DDV+LA++ + D     PP RE
Sbjct:   19 ILKDMGITEYEPRLVNQMLEFTYRYVTDVLEDAQAYSSHAGRTEIDSDDVKLAIQSRLDHSFTTPPPRE 87          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: UPI0018D789BF (transcription initiation factor TFIID subunit 9-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D789BF)

HSP 1 Score: 73.9 bits (180), Expect = 3.100e-14
Identity = 33/69 (47.83%), Postives = 49/69 (71.01%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTRE 69
            +LKD GVT YEPR+VN +++   RY  +V++DA+ Y++HAGR +I  DDV+LA++ + D     PP RE
Sbjct:   19 ILKDMGVTEYEPRLVNQMLEFTYRYVTDVLEDAQAYSNHAGRTEIDSDDVKLAIQGRLDHSFTTPPPRE 87          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: UPI00145569A7 (transcription initiation factor TFIID subunit 9-like n=1 Tax=Asterias rubens TaxID=7604 RepID=UPI00145569A7)

HSP 1 Score: 72.8 bits (177), Expect = 7.330e-14
Identity = 32/69 (46.38%), Postives = 48/69 (69.57%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTRE 69
            +LKD GV+ YEPR+VN +++   RY  +V++DA+ Y  HAGR +I +DDV+LA++ + D     PP RE
Sbjct:   20 ILKDMGVSDYEPRLVNQMLEFTYRYMTDVLEDAQAYTGHAGRTEIDVDDVKLAIKSRLDHSFTTPPPRE 88          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: A0A6J3BY69_GALME (transcription initiation factor TFIID subunit 9 n=1 Tax=Galleria mellonella TaxID=7137 RepID=A0A6J3BY69_GALME)

HSP 1 Score: 72.4 bits (176), Expect = 9.700e-14
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTREV 70
            ++K+ GVT YEPRVVN L++   RY   ++ DAR +A+HA +  I +DDVRLAV+ + D     PP REV
Sbjct:   26 IMKEVGVTDYEPRVVNQLLEFTYRYVTSILDDARVFANHAKKKTIDLDDVRLAVQMQLDKTFTSPPQREV 95          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: A0A556UYM4_BAGYA (Transcription initiation factor TFIID subunit 9 n=3 Tax=Teleostei TaxID=32443 RepID=A0A556UYM4_BAGYA)

HSP 1 Score: 72.0 bits (175), Expect = 9.960e-14
Identity = 29/69 (42.03%), Postives = 46/69 (66.67%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTRE 69
            +LKD G+T YEPRV+N +++ M RY   +++DA+ YA HA +  +  DD+RLA++ + D     PP R+
Sbjct:   17 ILKDMGITEYEPRVINQMLEFMYRYVTTIIEDAKIYATHAKKTSVDADDIRLAIQCRMDQSFTSPPPRD 85          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: A0A2D0SZ54_ICTPU (transcription initiation factor TFIID subunit 9-like isoform X1 n=23 Tax=Osteoglossocephalai TaxID=1489341 RepID=A0A2D0SZ54_ICTPU)

HSP 1 Score: 72.4 bits (176), Expect = 1.120e-13
Identity = 29/69 (42.03%), Postives = 47/69 (68.12%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTRE 69
            +LKD G+T YEPRV+N +++ M RY   +++DA+ YA HA + ++  DD+RLA++ + D     PP R+
Sbjct:   17 ILKDMGITEYEPRVINQMLEFMYRYVTTIIEDAKIYATHAKKANVDADDIRLAIQCRMDQSFTSPPPRD 85          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: A0A821WNC1_9NEOP (Hypothetical protein n=4 Tax=Pieris TaxID=7115 RepID=A0A821WNC1_9NEOP)

HSP 1 Score: 72.0 bits (175), Expect = 1.270e-13
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTREV 70
            ++K+ G+T YEPRVVN L++   RY   V+ DAR +A+HA +  I +DDVRLAV+ + D     PP REV
Sbjct:   26 IMKEVGITDYEPRVVNQLLEFTYRYVTSVLDDARVFANHARKKTIDLDDVRLAVQMQLDKSFTSPPPREV 95          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: UPI0018E4E058 (transcription initiation factor TFIID subunit 9 n=2 Tax=Coliadinae TaxID=42450 RepID=UPI0018E4E058)

HSP 1 Score: 72.0 bits (175), Expect = 1.270e-13
Identity = 34/70 (48.57%), Postives = 47/70 (67.14%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTREV 70
            ++K+ G+T YEPRVVN L++   RY   V+ DAR +A+HA +  I +DDVRLAV+ + D     PP REV
Sbjct:   26 IMKEVGITDYEPRVVNQLLEFTYRYVTSVLDDARVFANHAKKKTIDLDDVRLAVQMQLDKSFTSPPPREV 95          
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Match: A0A212EUX8_DANPL (transcription initiation factor TFIID subunit 9 n=1 Tax=Danaus plexippus plexippus TaxID=278856 RepID=A0A212EUX8_DANPL)

HSP 1 Score: 72.0 bits (175), Expect = 1.300e-13
Identity = 33/70 (47.14%), Postives = 49/70 (70.00%), Query Frame = 0
Query:    1 LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDVRLAVRKKQDALSAGPPTREV 70
            ++K+ G+T YEPRV+N L++   RY   V++DAR +A+HA + +I +DDVRLAV+ + D     PP REV
Sbjct:   26 IMKEIGITDYEPRVLNQLLEFTYRYVTSVLEDARVFANHAKKKNIDLDDVRLAVQMQLDKSFTSPPPREV 95          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1758.4957.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ7_ECTSI5.460e-3588.41Transcription initiation factor TFIID subunit n=2 ... [more]
A0A8B7Y458_ACAPL3.100e-1446.38transcription initiation factor TFIID subunit 9-li... [more]
UPI0018D789BF3.100e-1447.83transcription initiation factor TFIID subunit 9-li... [more]
UPI00145569A77.330e-1446.38transcription initiation factor TFIID subunit 9-li... [more]
A0A6J3BY69_GALME9.700e-1448.57transcription initiation factor TFIID subunit 9 n=... [more]
A0A556UYM4_BAGYA9.960e-1442.03Transcription initiation factor TFIID subunit 9 n=... [more]
A0A2D0SZ54_ICTPU1.120e-1342.03transcription initiation factor TFIID subunit 9-li... [more]
A0A821WNC1_9NEOP1.270e-1348.57Hypothetical protein n=4 Tax=Pieris TaxID=7115 Rep... [more]
UPI0018E4E0581.270e-1348.57transcription initiation factor TFIID subunit 9 n=... [more]
A0A212EUX8_DANPL1.300e-1347.14transcription initiation factor TFIID subunit 9 n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..59
e-value: 6.6E-20
score: 73.1
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..56
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 1..70
e-value: 1.0E-17
score: 64.3
NoneNo IPR availablePANTHERPTHR12595:SF6TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 1..70
NoneNo IPR availablePANTHERPTHR12595POS9-ACTIVATING FACTOR FAP7-RELATEDcoord: 1..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1758contigL-elsbetiae_contig1758:22186..23108 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1758.4957.1mRNA_L-elsbetiae_contig1758.4957.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1758 22186..23108 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1758.4957.1 ID=prot_L-elsbetiae_contig1758.4957.1|Name=mRNA_L-elsbetiae_contig1758.4957.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=72bp
LLKDAGVTSYEPRVVNHLVDRMRRYTLEVVQDARDYADHAGRVDIGMDDV
RLAVRKKQDALSAGPPTREVR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009072Histone-fold
IPR003162TFIID-31