prot_L-elsbetiae_contig1757.4948.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1757.4948.1
Unique Nameprot_L-elsbetiae_contig1757.4948.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length229
Homology
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BLAST of mRNA_L-elsbetiae_contig1757.4948.1 vs. uniprot
Match: A0A6H5L2E6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2E6_9PHAE)

HSP 1 Score: 129 bits (323), Expect = 6.140e-31
Identity = 79/152 (51.97%), Postives = 93/152 (61.18%), Query Frame = 0 
Query:    1 RVKRVQGPTATPSGVAALPE-VGSGDTEGAGIANTDARGLCVGDPFAMMVA---MGRGQYTLGLFCCTVAPSEGTRVGSGAVVKGKLMKLKQT-----TRALEAVEGASTSGAVSAAHSAPVGDSWDHWGDLGMHKGELSCKVRLVLPLDPD 143
            R+KR++G TA  SG A     VG    E AGI NTD+RG+ VGDPFAM+VA   M   QY LGLF CT AP +        V KG+LMKL+++       A+   EG  TS +      AP  DSW HWGDLG+HKGELSCK RLVL LDPD
Sbjct:  246 RLKRLRGYTAGQSGSATGSRGVGGRGEEAAGIGNTDSRGIVVGDPFAMLVATPGMRPAQYALGLFSCTKAPMDEQAQDGSPVFKGRLMKLQRSKVAPAVGAVRLGEGDGTSSSDFGEDGAPAKDSWQHWGDLGLHKGELSCKCRLVLALDPD 397
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1757.4948.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5L2E6_9PHAE6.140e-3151.97Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1757contigL-elsbetiae_contig1757:911..1597 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1757.4948.1mRNA_L-elsbetiae_contig1757.4948.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1757 9..1597 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1757.4948.1 ID=prot_L-elsbetiae_contig1757.4948.1|Name=mRNA_L-elsbetiae_contig1757.4948.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=229bp
RVKRVQGPTATPSGVAALPEVGSGDTEGAGIANTDARGLCVGDPFAMMVA
MGRGQYTLGLFCCTVAPSEGTRVGSGAVVKGKLMKLKQTTRALEAVEGAS
TSGAVSAAHSAPVGDSWDHWGDLGMHKGELSCKVRLVLPLDPDIVVEPAV
VEETVTRTAPGEGPATEGSAHVVERTLFRFTRADLVAVKATLVEEFGALK
AWSRRKPASAYCGRRRKPASDSRRPRPC*
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