prot_L-elsbetiae_contig1750.4926.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1750.4926.1
Unique Nameprot_L-elsbetiae_contig1750.4926.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length206
Homology
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BLAST of mRNA_L-elsbetiae_contig1750.4926.1 vs. uniprot
Match: D8LJW2_ECTSI (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJW2_ECTSI)

HSP 1 Score: 305 bits (781), Expect = 3.500e-103
Identity = 151/198 (76.26%), Postives = 167/198 (84.34%), Query Frame = 0 
Query:    8 RLFCVEAVVFPVSNPGSPGVPFRTFHDSSARRSAARGVLVSPVGGDVVQRGMSGISAAGFPSYTSSMLPIRFTNEQVQLNEGCLFRAHIDADWLETDIIAIEFRLLTSPLPENVPAPTEEAGPAAXXXXXXXXXPKNLREVGKVTLHAKCASSKGGMHRYHPLVFRHPYLCALDVTLHTALTSINHPGGPAGLAAAIA 205
            R+F VEAVVFPVSNP +PGVP RTFHD SARRS ARGVLV+P  GDV QRG SGISAAG PSYTSS+LPIRFTNE+VQLNEGCLFR HIDADW+ETD+IAIEFRLLT+PLPEN  APTE+   AA         P  L+EVGKVTLH KCASSKGG+HRYHPLVF+ P+LC +D+TLH ALTS+NHPGGPAGLAAAIA
Sbjct:   12 RVFGVEAVVFPVSNPYAPGVPVRTFHDPSARRSTARGVLVNPAEGDVDQRGSSGISAAGLPSYTSSLLPIRFTNEEVQLNEGCLFRVHIDADWVETDVIAIEFRLLTTPLPENDAAPTEDVIAAAGATVTPEKKPITLKEVGKVTLHTKCASSKGGLHRYHPLVFKQPHLCVVDITLHMALTSVNHPGGPAGLAAAIA 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1750.4926.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LJW2_ECTSI3.500e-10376.26Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1750contigL-elsbetiae_contig1750:4430..7309 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1750.4926.1mRNA_L-elsbetiae_contig1750.4926.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1750 4430..7309 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1750.4926.1 ID=prot_L-elsbetiae_contig1750.4926.1|Name=mRNA_L-elsbetiae_contig1750.4926.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=206bp
KNKNQKPRLFCVEAVVFPVSNPGSPGVPFRTFHDSSARRSAARGVLVSPV
GGDVVQRGMSGISAAGFPSYTSSMLPIRFTNEQVQLNEGCLFRAHIDADW
LETDIIAIEFRLLTSPLPENVPAPTEEAGPAAPAPPQEAAPPKNLREVGK
VTLHAKCASSKGGMHRYHPLVFRHPYLCALDVTLHTALTSINHPGGPAGL
AAAIAA
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