prot_L-elsbetiae_contig1749.4916.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_L-elsbetiae_contig1749.4916.1
Unique Name	prot_L-elsbetiae_contig1749.4916.1
Type	polypeptide
Organism	Laminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length	87

Homology

[Close]

BLAST of mRNA_L-elsbetiae_contig1749.4916.1 vs. uniprot
Match: D8LEK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK8_ECTSI)

HSP 1 Score: 71.2 bits (173), Expect = 1.490e-12
Identity = 29/52 (55.77%), Postives = 45/52 (86.54%), Query Frame = 0

Query:    2 VRRWINSGSLGLLTAIIVFYVSVGVPIRRLVFDPLESPDPRVAEALARRKEG 53
            V RW+N+  +G ++A ++F++S+G+PIR+LVFDPLES DPRV+ ALA+R++G
Sbjct:  269 VARWVNTRIMGFISATVIFFLSLGLPIRQLVFDPLESSDPRVSRALAKRRQG 320

[Close]

BLAST of mRNA_L-elsbetiae_contig1749.4916.1 vs. uniprot
Match: D8LEL1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEL1_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 3.120e-6
Identity = 22/48 (45.83%), Postives = 35/48 (72.92%), Query Frame = 0

Query:    5 WINSGSLGLLTAIIVFYVSVGVPIRRLVFDPLESPDPRVAEALARRKE 52
            WI    +  +++ ++F +S+G P R+L F+PLES DP V++ALARRK+
Sbjct:   43 WITERYIAFISSCVMFSLSLGAPARQLFFNPLESSDPEVSDALARRKD 90

The following BLAST results are available for this feature:

BLAST of mRNA_L-elsbetiae_contig1749.4916.1 vs. uniprot

BLAST of mRNA_L-elsbetiae_contig1749.4916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LEK8_ECTSI	1.490e-12	55.77	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
D8LEL1_ECTSI	3.120e-6	45.83	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 29..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 6..28
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..5
None	No IPR available	TMHMM	TMhelix		coord: 5..27

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
L-elsbetiae_contig1749	contig	L-elsbetiae_contig1749:9288..10953 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW15	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_L-elsbetiae_contig1749.4916.1	mRNA_L-elsbetiae_contig1749.4916.1	Laminarionema elsbetiae ELsaHSoW15	mRNA	L-elsbetiae_contig1749 9286..10953 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_L-elsbetiae_contig1749.4916.1 ID=prot_L-elsbetiae_contig1749.4916.1|Name=mRNA_L-elsbetiae_contig1749.4916.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=87bp
SVRRWINSGSLGLLTAIIVFYVSVGVPIRRLVFDPLESPDPRVAEALARR
KEGGGTLLAMGDHEASAAYSTGVGAFDSDDEVHAEMT