prot_L-elsbetiae_contig17482.4913.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17482.4913.1
Unique Nameprot_L-elsbetiae_contig17482.4913.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length185
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig17482.4913.1 vs. uniprot
Match: D7FUK9_ECTSI (Sterol or diacylglycerol O-acyltransferase, partial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUK9_ECTSI)

HSP 1 Score: 192 bits (487), Expect = 2.850e-55
Identity = 107/196 (54.59%), Postives = 126/196 (64.29%), Query Frame = 0 
Query:    1 MWSVPVHRWLSACVHWPMLELTR------GGTGAP-----TATTTKTAGAPTTKISKGGWLPAVLATFLVSGVFHEAIVYVAMRGSCWPFNTFLLCVAGFLITTWDVVFPKLHSRPAAGD--GKPSASASGGGSAASHQGPKEDGDVGGGGATANVVRAYGDRGHVSAFFFSFLIQLSAFIADTAAWLWWRHIHMK 183
            MWS PVHRWLS CVHWPMLEL         GT +P     +  T + AG P    SK  W+PAVLATF+VSGVFHEA+VY+AMRG+CWPFNTFLLCV G L+  WD+VFP    +P++    G P  +A+          P+ +G     GA   VVRAYG RG +SA  F   +QLSAFIAD AAWLWWRHIHMK
Sbjct:  356 MWSTPVHRWLSTCVHWPMLELCSTSDEGVDGTKSPPSAELSTATAEVAGDP----SKWTWVPAVLATFVVSGVFHEAVVYIAMRGTCWPFNTFLLCVGGVLVIFWDIVFPLPDLKPSSESEGGSPPQTAT--------LSPRNEG-----GAGKKVVRAYGHRGRMSAAAFCVSVQLSAFIADCAAWLWWRHIHMK 534
[Close]
BLAST of mRNA_L-elsbetiae_contig17482.4913.1 vs. uniprot
Match: D7FQV8_ECTSI (Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQV8_ECTSI)

HSP 1 Score: 64.7 bits (156), Expect = 7.240e-9
Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 0 
Query:   49 WLPAVLATFLVSGVFHEAIVYVAMRGSCWPFNTFLLCVAGFLITTWDVVFP 99
            WL +V+ +FLVSGV HEA+ +VAMR + WPF+TF L V   +   WD +FP
Sbjct:  538 WLASVVCSFLVSGVVHEAVGFVAMRRTVWPFSTFFLAVTASMAPFWDTLFP 588
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17482.4913.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FUK9_ECTSI2.850e-5554.59Sterol or diacylglycerol O-acyltransferase, partia... [more]
D7FQV8_ECTSI7.240e-952.94Diacylglycerol O-acyltransferase n=1 Tax=Ectocarpu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 73..78
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 155..177
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 178..184
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 79..97
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..48
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 155..177
NoneNo IPR availableTMHMMTMhelixcoord: 76..98

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17482contigL-elsbetiae_contig17482:607..1161 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17482.4913.1mRNA_L-elsbetiae_contig17482.4913.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17482 562..2877 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17482.4913.1 ID=prot_L-elsbetiae_contig17482.4913.1|Name=mRNA_L-elsbetiae_contig17482.4913.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=185bp
MWSVPVHRWLSACVHWPMLELTRGGTGAPTATTTKTAGAPTTKISKGGWL
PAVLATFLVSGVFHEAIVYVAMRGSCWPFNTFLLCVAGFLITTWDVVFPK
LHSRPAAGDGKPSASASGGGSAASHQGPKEDGDVGGGGATANVVRAYGDR
GHVSAFFFSFLIQLSAFIADTAAWLWWRHIHMKA*
back to top