prot_L-elsbetiae_contig1748.4910.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1748.4910.1
Unique Nameprot_L-elsbetiae_contig1748.4910.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length741
Homology
BLAST of mRNA_L-elsbetiae_contig1748.4910.1 vs. uniprot
Match: D7FRX1_ECTSI (SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX1_ECTSI)

HSP 1 Score: 585 bits (1509), Expect = 4.000e-198
Identity = 488/726 (67.22%), Postives = 521/726 (71.76%), Query Frame = 0
Query:   24 MPLTMRPIPHALNLGAPEIYGQGPTGQGTQGTQVLEDVNMASMVGTLAQLGALATYAQDMFDGLFQTADSLANQVSAASTRCSRLLQALPEAERRTAEAIGNGTGIDDNAAVEAIKAERQHANQVESEAAAKVFLPEAMPRWLVERYHSPEVARVPDLHLIDAVLSLEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXXGGEQDEENSRVSRPARKSLSDWRGKFAMSAAGLGIGSGAGAASRGGSARSSAGDVSSLVGNEKVVVQKREAYGDKFYRQEEEFADTGYQITPSDPGAEGTAVPTG---VQQVGALTAEDFNRKSGGLTENDRRLFKPQSARAGELGAQPTASLPPRPQRPPPPQGPAA---RPGTSPXXXXXXXXXXXXXXXXXXPVAQGEYSAAAAVASGQPLPGPGTAPPVPXXXXXXXXXXXXXXXXXXXXXXXXXAAPVAPPVPHARRPSYHEPMAAVP-EPEVMVDETPSR-PSYETWGVDRPPPPQALQEFEYD-APPMVPTASPLPAQVSSEPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTGHAPXXXXXXXASFGTNTGGASVRGDLLASITDGKKLKKVERPAPEAGXXXXXG-SELLDAIXXXXXXXXXXXXQAPAAETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDE 739
            MPLTMRPIPHALNLG PEIYGQGP+GQGT GTQVLEDVNMASMVGTLAQLG LATYAQDMFDGLFQTAD L+ ++SAASTRCS LLQALPEAE+RTAEAIG+GTGIDDNAAVEAIKAERQHA Q ESEAA+KVF PEAMPRWLVERYHSPEVARVPDLHLIDAVLS EEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXX G E+DEE +R  RPARKSL DWRGK A+ AAGLGIGS     SRG S R  AGDVSSLVG +KVVVQKREAY DKFYR+EEE ADT YQI PSD GA   AVP+G   +QQ+GALT EDFNRK G  +E  R LFKP SAR                              RPG+  XXXXXXXXXXXXXXXXXX                             XXXXXXXXXXXXXX XXXXXXXXXX        P+A RPSY EP+     E E M++ET +R PSYE+WG+    PP+  Q FE+  AP + P A       +  PP                                   XXXXXX  S GHA XXXXXXX      +GGAS+RGDLLASIT+GKKLKKVERPAP A XXXXX  +E     XXXXXXXXXXXX APA ETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWD+
Sbjct:    1 MPLTMRPIPHALNLGDPEIYGQGPSGQGTPGTQVLEDVNMASMVGTLAQLGVLATYAQDMFDGLFQTADDLSKKISAASTRCSNLLQALPEAEKRTAEAIGSGTGIDDNAAVEAIKAERQHAKQAESEAASKVFHPEAMPRWLVERYHSPEVARVPDLHLIDAVLSHEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEKSVREKXXXXXXXXXXXXXXXXXXXXAGVEKDEERARAPRPARKSLGDWRGKLAVGAAGLGIGSXXXGVSRGASTRG-AGDVSSLVGQDKVVVQKREAYSDKFYRKEEEEADTSYQIAPSDAGA---AVPSGGQQLQQLGALTPEDFNRKLGSASEGGRLLFKPPSARGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------------XXXXXXXXXXXXXXXXXXXXAXXXXXXXXXXXXXXXXTQPYAPRPSYQEPIVTPTLESEAMMEETHARRPSYESWGI----PPEPAQNFEHGGAPAVAPPAXXXXXXXAQLPP----------------------VQEASQFGQPPLPXXXXXXMPSMGHAXXXXXXXXXXX--XSGGASMRGDLLASITNGKKLKKVERPAPVAXXXXXXXXNEXXXXXXXXXXXXXXXXXXAPAVETSNPLFGGNPGINEILARRKYLEAESXXXXXXXXXXWDD 681          
BLAST of mRNA_L-elsbetiae_contig1748.4910.1 vs. uniprot
Match: A0A7R9U748_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U748_9STRA)

HSP 1 Score: 87.4 bits (215), Expect = 5.790e-15
Identity = 66/206 (32.04%), Postives = 102/206 (49.51%), Query Frame = 0
Query:   24 MPLTMRPIPHALNLGAPEIYGQGPTGQGTQGTQVLEDVNMASMVGTLAQLGALATYAQDMFDGLFQTADSLANQVSAASTRCSRLLQALPEAER---RTAEAIGNGTGIDDNAAVEAIKAERQHANQVESEAAAKVFLPEAMPRWLVERYHSPEVARVPDLHLIDAVLSLEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQ 226
            MP+  R I H L    P++Y   P         VL++++MAS+ G +AQLG LA+YA +MF  L   A+  + ++ AAS +   LL  L + +       + +G   G++            +   +V+S     +F  +AMP  +  RY +  V R P L  +D V+  E     TK     CA R+SNP+FF +EW++ E ERQ
Sbjct:    1 MPIVKRGIAHPLAYADPQLYENSPP------ELVLQNIDMASLSGAMAQLGNLASYATEMFRELMDIANEQSKRLVAASEKTEGLLLKLRDVDSVVSTNTKPLGAAGGVEVTV---------REPQEVDS----GLFDKDAMPMAIRHRYENEVVQRAPPLQRLDTVVLPE-----TKKEWGPCADRFSNPRFFREEWFKAEKERQ 182          
BLAST of mRNA_L-elsbetiae_contig1748.4910.1 vs. uniprot
Match: A0A7S4F0Z7_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F0Z7_CHRCT)

HSP 1 Score: 56.6 bits (135), Expect = 6.440e-5
Identity = 51/180 (28.33%), Postives = 77/180 (42.78%), Query Frame = 0
Query:   58 LEDVNMASMVGTLAQLGALATYAQDMFDGLFQTADSLANQVSAASTRCSRLLQALPEAE--------RRTAEAIGNGTGIDDNAAVEAIKAERQHANQVESEAAAKVFLPEAMPRWLVERYHSPEVARVP-DLHLIDAVLSLEEKSLLTKDGLDSCALRYSNPQFFYQEWYRLELERQEK 228
            LE  NMA++VG +AQLG LATYA ++F+GL + A+    ++ A  TR                       A+  G+  GI+ NA               E +  +  FL  + P  +   +   + AR P  L  +D  +            +DSCA  YS+  FF ++W   E +RQ K
Sbjct:    1 LETTNMAALVGVMAQLGFLATYAHEIFNGLAEEANEGVRRIGALKTRXXXXXXXXXXXXXXXXALGGHEIADICGSDVGIEFNA---------------EPDEESDFFLETSRPPSIRAAF---DAARPPPQLSALDPFVDAAPSVYAKYGFVDSCACAYSDAHFFMKQWLDEEEKRQRK 162          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1748.4910.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FRX1_ECTSI4.000e-19867.22SCAR-WAVE n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
A0A7R9U748_9STRA5.790e-1532.04Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S4F0Z7_CHRCT6.440e-528.33Hypothetical protein (Fragment) n=1 Tax=Chrysotila... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 220..250
NoneNo IPR availablePRINTSPR01217PRICHEXTENSNcoord: 405..421
score: 42.35
coord: 476..492
score: 51.76
coord: 425..437
score: 44.62
coord: 454..475
score: 37.27
NoneNo IPR availableGENE3D1.20.58.1570coord: 673..739
e-value: 7.1E-8
score: 34.4
coord: 131..274
e-value: 3.6E-6
score: 28.8
NoneNo IPR availableGENE3D1.20.5.340coord: 24..116
e-value: 9.8E-6
score: 27.8
NoneNo IPR availablePANTHERPTHR12902:SF1MIP02973Pcoord: 24..250
IPR003124WH2 domainSMARTSM00246wh2_8coord: 674..691
e-value: 1.8E-4
score: 30.9
coord: 644..661
e-value: 0.53
score: 19.3
IPR003124WH2 domainPFAMPF02205WH2coord: 671..692
e-value: 2.1E-6
score: 27.4
coord: 642..662
e-value: 9.1E-5
score: 22.2
IPR003124WH2 domainPROSITEPS51082WH2coord: 644..661
score: 8.313
IPR003124WH2 domainPROSITEPS51082WH2coord: 674..691
score: 10.144
IPR028288SCAR/WAVE familyPANTHERPTHR12902WASP-1coord: 24..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1748contigL-elsbetiae_contig1748:7967..18572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1748.4910.1mRNA_L-elsbetiae_contig1748.4910.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1748 7967..18572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1748.4910.1 ID=prot_L-elsbetiae_contig1748.4910.1|Name=mRNA_L-elsbetiae_contig1748.4910.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=741bp
VLVLLFQVRHRRDLTLVGIAVAKMPLTMRPIPHALNLGAPEIYGQGPTGQ
GTQGTQVLEDVNMASMVGTLAQLGALATYAQDMFDGLFQTADSLANQVSA
ASTRCSRLLQALPEAERRTAEAIGNGTGIDDNAAVEAIKAERQHANQVES
EAAAKVFLPEAMPRWLVERYHSPEVARVPDLHLIDAVLSLEEKSLLTKDG
LDSCALRYSNPQFFYQEWYRLELERQEKSVREKKQKKEERKRRKAAAKAA
GARTGGEQDEENSRVSRPARKSLSDWRGKFAMSAAGLGIGSGAGAASRGG
SARSSAGDVSSLVGNEKVVVQKREAYGDKFYRQEEEFADTGYQITPSDPG
AEGTAVPTGVQQVGALTAEDFNRKSGGLTENDRRLFKPQSARAGELGAQP
TASLPPRPQRPPPPQGPAARPGTSPPPPTPASAARPPALPQPPPVAQGEY
SAAAAVASGQPLPGPGTAPPVPPPPPTARPPPPRAAPPPPPPPPPPPAAP
VAPPVPHARRPSYHEPMAAVPEPEVMVDETPSRPSYETWGVDRPPPPQAL
QEFEYDAPPMVPTASPLPAQVSSEPPPPPPMPPSRPPAAPPVSAGLPPGH
RASQSGQPPLPPPLPPPLPSTGHAPPPPPPPPASFGTNTGGASVRGDLLA
SITDGKKLKKVERPAPEAGGGGGGGSELLDAIRGGAQLKKVERPQAPAAE
TSNPLFGGNPGINEILARRKYLEAESEDSDSDDDSDWDED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003124WH2_dom
IPR028288SCAR/WAVE_fam