prot_L-elsbetiae_contig1742.4891.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1742.4891.1
Unique Nameprot_L-elsbetiae_contig1742.4891.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length97
Homology
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BLAST of mRNA_L-elsbetiae_contig1742.4891.1 vs. uniprot
Match: D7G4Q4_ECTSI (Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Q4_ECTSI)

HSP 1 Score: 87.4 bits (215), Expect = 4.480e-18
Identity = 55/95 (57.89%), Postives = 64/95 (67.37%), Query Frame = 0 
Query:    4 SRCLTRRPLGLSRPSTFRVANANCN-GIG-VQVLNRGAGGVPGKRRKYRGDFKFVDKLRIVASGGKGGDGCISLEGEHIEMCAPDRDRDPPSGCS 96
            SRC   R LG+ R       +  C+ G+  V VLNR AGG PGKRR +RGD+KFVDKLRI+ASGGKGGDGCISLEG++     P R R  PSG S
Sbjct:    7 SRC---RVLGVLRVCHLGFGSPGCHAGVSSVLVLNRQAGGRPGKRRNHRGDYKFVDKLRILASGGKGGDGCISLEGDN-----PTRKR--PSGGS 91
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1742.4891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G4Q4_ECTSI4.480e-1857.89Mtg2, mitochondrial Obg/CtgA-like GTPase n=1 Tax=E... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1742contigL-elsbetiae_contig1742:22832..23384 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1742.4891.1mRNA_L-elsbetiae_contig1742.4891.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1742 22804..23915 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1742.4891.1 ID=prot_L-elsbetiae_contig1742.4891.1|Name=mRNA_L-elsbetiae_contig1742.4891.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=97bp
MLLSRCLTRRPLGLSRPSTFRVANANCNGIGVQVLNRGAGGVPGKRRKYR
GDFKFVDKLRIVASGGKGGDGCISLEGEHIEMCAPDRDRDPPSGCS*
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