prot_L-elsbetiae_contig17.4683.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig17.4683.1
Unique Nameprot_L-elsbetiae_contig17.4683.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length380
Homology
BLAST of mRNA_L-elsbetiae_contig17.4683.1 vs. uniprot
Match: A0A6H5JBB0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBB0_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 1.700e-57
Identity = 124/275 (45.09%), Postives = 168/275 (61.09%), Query Frame = 0
Query:   53 MDARVPVLKAACVLNREFLWKEQVREVLTAKDSWGRTLASHGILSGSPQVFELTMSALRADVLDEEVENLVEDVEQYDREKPLVVAKTTGGREMAASVQSKMRVLKRDVDLRAKASTFEAKIQSFIPGKLIVIFQLLLPEVGNQREIRLGLLLIMSVLAPIIAWASVLIMRRRSSEEDFVPRRSIYSYCLAAPAMFVWGTGTSNIFSNDMDMEDSNDPEGFGWEESRSAVVLAVGAIVIPAIDGFVNSNRVEQWNDKFSFSRWRFSRQAELRWNK 327
            +D  + VLK+A  L       E+VRE L A DSWGRT+  H +L+  P+VF+    A R  +LD+E+  L+   ++   +  +  A  T  R MAA V  + + LKR + L  +AST E+KIQSFIPGKLIVIFQLLLPEVG+    +L LL+IMS +AP ++WA+ L+ R +    +   RRS+ S  L+APAMF WG GTS +              G GW +S +A  LAV  I+IPA+D F NS +VEQW DK+S  RWRFS++A  +W K
Sbjct:  365 LDPGMAVLKSALAL------VEEVREQLKATDSWGRTIFGHAVLTRRPKVFDAVFFAAREHILDDEIAALMGINKEDKSDTVMETALQTVPRAMAARVARRDQELKRAITLEERASTIESKIQSFIPGKLIVIFQLLLPEVGSSD--KLTLLIIMSAIAPGLSWAAGLVAREKPGSTE--KRRSLVSLFLSAPAMFFWGLGTSTVGMT----------HGMGWNDSATAAALAVATIIIPAMDAFFNSRKVEQWYDKWSCQRWRFSQRAHAKWVK 619          
BLAST of mRNA_L-elsbetiae_contig17.4683.1 vs. uniprot
Match: A0A6H5KM21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM21_9PHAE)

HSP 1 Score: 162 bits (410), Expect = 4.640e-41
Identity = 101/247 (40.89%), Postives = 136/247 (55.06%), Query Frame = 0
Query:   53 MDARVPVLKAACVLNREFLWKEQVREVLTAKDSWGRTLASHGILSGSPQVFELTMSALRADVLDEEVENLVED-VEQYDREKPLVVAKTTG-GREMAASVQSKMRVLKRDVDLRAKASTFEAKIQSFIPGKLIVIFQLLLPEVGNQREIRLGLLLIMSVLAPIIAWASVLIMRRRSSEEDFVPRRSIYSYCLAAPAMFVWGTGTSNIFSNDMDMEDSNDPEGFGWEESRSAVVLAVGAIVIPAIDGF 297
            +D R+PV++A     R  LW  + R++L A+D W R++  H I+SG  Q+FE   +A R D+ DE+++ L++  VE    +  L  A  +  G  MA  VQ K   LK DV  R   ST  AKIQ+FIPG LIVIFQLLLPE     +  L LLL++  +AP  +W   + ++R     +   R++   Y LA PAMF WG GTS I            P  F W ES SA  LAV  IVIPA+D +
Sbjct:  249 LDPRLPVIQAVLEFARANLWMPEYRKLLEARDGWHRSIIEHAIMSGRTQIFETIFNAFRRDIHDEKIDLLLDPGVETSHAQTSLRRATNSQEGTPMAQLVQEKTTSLKSDVSKRKDDSTVAAKIQAFIPGNLIVIFQLLLPEFDESGDGPLYLLLVLCFIAPFWSWGVAMSVKRDPEITNTRARQTAAKYFLAIPAMFFWGVGTSKIA-----------PNSFNWAESASAAALAVATIVIPALDTY 484          
BLAST of mRNA_L-elsbetiae_contig17.4683.1 vs. uniprot
Match: D7FN08_ECTSI (Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN08_ECTSI)

HSP 1 Score: 155 bits (392), Expect = 1.190e-38
Identity = 98/254 (38.58%), Postives = 134/254 (52.76%), Query Frame = 0
Query:   57 VPVLKAACVLNREFLWKEQVREVLTAKDSWGRTLASHGILSGSPQVFELTMSALRADVLDEEVENLVEDVEQYDREKPLVVAKTTGGREMAASVQSKMRVLKRDVDLRAKASTFEAKIQSFIPGKLIVIFQLLLPEVGNQREIRLGLLLIMSVLAPIIAWASVLIMRRRSSEEDFVPRRSI-YSYCLAAPAMFVWGTGTSNIFSNDMDMEDSNDPEGFGWEESRSAVVLAVGAIVIPAIDGFVNSNRVEQWNDK 309
            VPV K A  L    LW ++V + L A D WGR++ +H +LSG   +FE    A+R  + DE V  ++E  E    + P++ A   G  +M      +   LK+DVD R+K ST +AKI+ FIPGKL+V+FQLLLP++   R+  L LL IM  LAP++  A+   +    S+   V  RS   S  L APAMF WG GTS +                GW  S SA  +A   + IPA+D F NS +     DK
Sbjct:  335 VPVFKVAVRLVTRCLWTDEVLQQLKAVDLWGRSVLTHALLSGHEMMFEAAYGAVRDVLQDELVSEMMETNEGEREDTPMIDALARGNTDMRKLYALRAGQLKKDVDARSKLSTMDAKIEGFIPGKLVVMFQLLLPQIAEGRQ--LILLYIMCALAPLVKLATTGSVDDSDSKHTGVKARSNKLSVLLGAPAMFFWGVGTSTVGQT-----------ALGWSSSLSATSMAAATLAIPAVDSFFNSRKASAIGDK 575          
BLAST of mRNA_L-elsbetiae_contig17.4683.1 vs. uniprot
Match: D7FWX2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWX2_ECTSI)

HSP 1 Score: 153 bits (387), Expect = 1.410e-38
Identity = 99/247 (40.08%), Postives = 134/247 (54.25%), Query Frame = 0
Query:   53 MDARVPVLKAACVLNREFLWKEQVREVLTAKDSWGRTLASHGILSGSPQVFELTMSALRADVLDEEVENLVED-VEQYDREKPLVVAKTTG-GREMAASVQSKMRVLKRDVDLRAKASTFEAKIQSFIPGKLIVIFQLLLPEVGNQREIRLGLLLIMSVLAPIIAWASVLIMRRRSSEEDFVPRRSIYSYCLAAPAMFVWGTGTSNIFSNDMDMEDSNDPEGFGWEESRSAVVLAVGAIVIPAIDGF 297
            +D R+PV++AA    R  LW  + R++L A+D W R++  H I+SG  Q+FE   +A R DV DE+++ L++  VE    +  L  A  +  G  MA  V+ K   LK DV  R   ST  AKIQ+FIPG LIVIFQLLLPE     +  L LLL++  +AP  +W + + ++R     +            A+PAMF WG GTS I            P  F W ES SA  LAV  IVIPA+D +
Sbjct:  131 LDPRLPVIQAALEFARANLWMPEYRKLLEARDGWHRSIIEHAIMSGRTQIFEAVFNAFRRDVHDEKIDLLLDPGVETSHAQTSLRRAMNSQEGTPMAQLVREKTTSLKSDVTKRKDDSTVAAKIQAFIPGNLIVIFQLLLPEFDESGDGPLYLLLVLCFIAPFWSWGAAMSVKRDPETTN----------TRASPAMFFWGVGTSKIA-----------PNSFNWAESASAAALAVATIVIPALDTY 356          
BLAST of mRNA_L-elsbetiae_contig17.4683.1 vs. uniprot
Match: D7FST7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FST7_ECTSI)

HSP 1 Score: 86.3 bits (212), Expect = 7.970e-15
Identity = 56/132 (42.42%), Postives = 78/132 (59.09%), Query Frame = 0
Query:   53 MDARVPVLKAACVLNREFLWKEQVREVLTAKDSWGRTLASHGILSGSPQVFELTMSALRADVLDEEVENLVEDVEQYDREKPLVVAKTTGGREMAASVQSKMRVLKRDVDLRAKASTFEAKIQSFIPGKLIV 184
            +D  + VLK+A  L +E      VRE L A DSWGRT+  H +L+  P+VF+    A R  +LD+E+  L+   ++   +  +  A  T  R MAA V  + + LKR + L  +AST E+KIQSFIPGKLIV
Sbjct:  321 LDPGMAVLKSAWALVKE------VREQLKATDSWGRTIFGHAVLTRRPKVFDAVFFAAREYILDDEIAALMGINKEDKSDTIMETALQTVPRAMAARVARRDQELKRAITLEERASTIESKIQSFIPGKLIV 446          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig17.4683.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JBB0_9PHAE1.700e-5745.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KM21_9PHAE4.640e-4140.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FN08_ECTSI1.190e-3838.58Kinase, NEK n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
D7FWX2_ECTSI1.410e-3840.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FST7_ECTSI7.970e-1542.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 112..132
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..200
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 237..258
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 278..298
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 259..277
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 222..236
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 201..221
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 299..379
NoneNo IPR availableTMHMMTMhelixcoord: 278..300
NoneNo IPR availableTMHMMTMhelixcoord: 236..258
NoneNo IPR availableTMHMMTMhelixcoord: 201..223

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig17contigL-elsbetiae_contig17:44610..52931 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig17.4683.1mRNA_L-elsbetiae_contig17.4683.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig17 44561..53996 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig17.4683.1 ID=prot_L-elsbetiae_contig17.4683.1|Name=mRNA_L-elsbetiae_contig17.4683.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=380bp
MSLSVSASKPPHQRHHHHHHQQKPHPSQPAATVAETAVPEQPQQMIIPAG
NGMDARVPVLKAACVLNREFLWKEQVREVLTAKDSWGRTLASHGILSGSP
QVFELTMSALRADVLDEEVENLVEDVEQYDREKPLVVAKTTGGREMAASV
QSKMRVLKRDVDLRAKASTFEAKIQSFIPGKLIVIFQLLLPEVGNQREIR
LGLLLIMSVLAPIIAWASVLIMRRRSSEEDFVPRRSIYSYCLAAPAMFVW
GTGTSNIFSNDMDMEDSNDPEGFGWEESRSAVVLAVGAIVIPAIDGFVNS
NRVEQWNDKFSFSRWRFSRQAELRWNKLRAQANKPTNYQPDRSSFELSAA
AKIRKPGSHNVPAPIAEHQVGEGKLSEEV*
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