prot_L-elsbetiae_contig1652.4420.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1652.4420.1
Unique Nameprot_L-elsbetiae_contig1652.4420.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length784
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: A0A2H4ECA4_9PHAE (SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=1813763 RepID=A0A2H4ECA4_9PHAE)

HSP 1 Score: 280 bits (715), Expect = 8.430e-78
Identity = 265/507 (52.27%), Postives = 308/507 (60.75%), Query Frame = 0 
Query:    1 MLCDDLRASCRIGAPAKISGGGGLHPSKPSCWALIEGVGVPKQGLSPSVPPALR-GAPLRRPEGAGQPRHG---GXXXXXXXXXXXXXXDSVEESCDSKKRVFSKYDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKEQSLAGKK-PQQSPQXXXXXXXXXXXXXXXXXXTS----MAMSGSNSSSYVPGEMSQREL----GPNSGHGMHH-------QQQMPPVSGIHHNSSSLAHSVNGSVNGSGDGATGMPFDPRSSGAMDGAAGNRAAMPGTANDGGWVDRSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-PQHPGALAPGLVYAASKAARAAQNDPP-NRDQHMPPWMNQPGSTMERRGHTMVYPHGGFRT-----GPPXXXXXXXXXXXXXXQQGGV---DPRDDPRMDPSSVSQYTTDMRGFDPSSSAYHQAQQNHEALRRRD 477
            MLCDD+RA+CR+G   K   G     SK SCWA ++G+GVPK+ + P    AL  G     P    +P  G   G              D  E S  S+KRVFSKYDEETTSILTEWFLAHKRWPYPA+KEK+ LAE T LTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPK+ SL  KK P Q  QXXXXXXXXXXXXXXXXXX      +A+ G+NS  +   + +Q  +    G +SG  +HH           P +  + +N  S                  MPFD RS+ A             T   G W+D+SRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  PQHPGALAPGLVYA+  A +AA  DP     QH+P WM  P   MERRGH+M YPHGG RT     G                 QG     + RD  RM  ++  Q++  +RGFD ++S +HQAQQ+HE+LRR D
Sbjct:  119 MLCDDIRAACRLGTTTKPGAGVAGKQSKLSCWATVQGIGVPKKAVVPPPSEALSDGEKNDDPPSLPRPASGSTVGSGSGEGDDQEDGNGDDHETSI-SRKRVFSKYDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKDHSLVEKKLPLQQEQXXXXXXXXXXXXXXXXXXXQQQRGIAVVGANS--FALPDTAQHGMNNGNGNSSGTQVHHGGGXXXXXXXXPALPSLPYNGQSSR----------------MPFDTRSTAAE------------TPGGGAWLDQSRQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGPQHPGALAPGLVYASKAARQAANMDPSIQSSQHIPLWMTPPVG-MERRGHSMAYPHGGMRTAQHNQGQGQDKGQGGPLHPSTPPQGATQVPNSRDGSRM--NTAPQFSG-IRGFD-TNSGFHQAQQSHESLRRGD 589
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: D7FSW8_ECTSI (Homeobox domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSW8_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 2.700e-53
Identity = 105/174 (60.34%), Postives = 117/174 (67.24%), Query Frame = 0 
Query:    1 MLCDDLRASCRIGAPAKISGGGGLHPSKPSCWALIEGVGVPKQGLSPSVPPALR-GAPLRRPEGAGQPRHG---GXXXXXXXXXXXXXXDSVEESCDSKKRVFSKYDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFE 170
            MLCDD+RA+CR+G   K   G     SK SCWA ++G+GVPK+ + P    AL  G     P    +P  G   G              D  E S  S+KRVFSKYDEETTSILTEWFLAHKRWPYPA+KEK+ LAE T LTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFE
Sbjct:    1 MLCDDIRAACRLGTTTKPGAGVAGKQSKLSCWATVQGIGVPKKAVVPPPSEALSDGEKNDDPPSLPRPASGSTVGSGSGEGDDQEDGNGDDHETSI-SRKRVFSKYDEETTSILTEWFLAHKRWPYPASKEKNELAEKTNLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFE 173
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: G1QCC7_MYOLU (SIX homeobox 2 n=2 Tax=Myotis lucifugus TaxID=59463 RepID=G1QCC7_MYOLU)

HSP 1 Score: 62.4 bits (150), Expect = 1.690e-7
Identity = 36/89 (40.45%), Postives = 50/89 (56.18%), Query Frame = 0 
Query:  102 YDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKEQSLAGKKPQQSP 190
            + E++ S+L EW+ AH   PYP+ +EK  LAEAT LTT Q+SNWF N+R+R      K+          F +++P    L  K P  SP
Sbjct:   89 FKEKSRSVLREWY-AHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKE------GLGAFVLLSPFSYELPSKPPVSSP 168
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: UPI001CFDB789 (uncharacterized protein n=1 Tax=Naegleria lovaniensis TaxID=51637 RepID=UPI001CFDB789)

HSP 1 Score: 66.2 bits (160), Expect = 2.230e-7
Identity = 29/56 (51.79%), Postives = 41/56 (73.21%), Query Frame = 0 
Query:  105 ETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKK 160
            + T +L +WFL H + PYP+ +EK AL++ T L+ +Q+SNWFTN RKR W  V+KK
Sbjct:  953 DATEVLKDWFLEHIQHPYPSGQEKQALSQQTGLSYVQVSNWFTNTRKRSWQ-VMKK 1007
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: A0A6A5BGY8_NAEFO (Homeobox domain-containing protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5BGY8_NAEFO)

HSP 1 Score: 65.9 bits (159), Expect = 2.970e-7
Identity = 29/54 (53.70%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:  107 TSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKK 160
            T +L +WFL H + PYP+ +EK AL++ T L+ +Q+SNWFTN RKR W  V+KK
Sbjct: 1020 TEVLKDWFLEHIQHPYPSGQEKQALSQQTGLSYVQVSNWFTNTRKRSWQ-VMKK 1072
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: V8NE58_OPHHA (Homeobox protein SIX2 (Fragment) n=4 Tax=Bifurcata TaxID=1329961 RepID=V8NE58_OPHHA)

HSP 1 Score: 63.2 bits (152), Expect = 5.300e-7
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = 0 
Query:  102 YDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKEQSLAGKK 185
            + E++ S+L EW+ AH   PYP+ +EK  LAEAT LTT Q+SNWF N+R+R      K+R     +       NP   SL G K
Sbjct:  144 FKEKSRSVLREWY-AHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERYEENNENSSSNGHNPLSSSLNGNK 224
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: H9GNL3_ANOCA (Homeobox domain-containing protein n=2 Tax=Anolis carolinensis TaxID=28377 RepID=H9GNL3_ANOCA)

HSP 1 Score: 62.8 bits (151), Expect = 6.650e-7
Identity = 34/80 (42.50%), Postives = 49/80 (61.25%), Query Frame = 0 
Query:  102 YDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKEQSL 181
            + E++ S+L EW+L +   PYP+ +EK  LAEAT LTT Q+SNWF N+R+R      K+R  S   F +     P+E+ L
Sbjct:  148 FKEKSRSVLREWYLHN---PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAETKERESSEGGFLKEGRGLPRERHL 224
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: A0A7L0PI97_9AVES (SIX1 protein (Fragment) n=1 Tax=Mesembrinibis cayennensis TaxID=1118748 RepID=A0A7L0PI97_9AVES)

HSP 1 Score: 60.5 bits (145), Expect = 7.910e-7
Identity = 31/63 (49.21%), Postives = 42/63 (66.67%), Query Frame = 0 
Query:   99 FSKYDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKR 161
            F  + E++ S+L EW+ AH   PYP+ +EK  LAEAT LTT Q+SNWF N+R+R      K+R
Sbjct:  120 FKXFKEKSRSVLREWY-AHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKER 179
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: A0A7K5L240_VIRAL (SIX1B protein (Fragment) n=2 Tax=Passeriformes TaxID=9126 RepID=A0A7K5L240_VIRAL)

HSP 1 Score: 62.4 bits (150), Expect = 7.930e-7
Identity = 36/87 (41.38%), Postives = 50/87 (57.47%), Query Frame = 0 
Query:  102 YDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKEQSLAGKKPQQ 188
            + E++  +L EW+ AH   PYP+ +EK  LAEAT LTT Q+SNWF N+R+R      K+R   P       + NP+  + A  KP Q
Sbjct:  127 FKEKSRGVLREWY-AHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERYVPP-------LQNPENNNAATNKPNQ 203
[Close]
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Match: A0A6P6E4J4_OCTDE (homeobox protein SIX2 isoform X1 n=3 Tax=Boreoeutheria TaxID=1437010 RepID=A0A6P6E4J4_OCTDE)

HSP 1 Score: 62.4 bits (150), Expect = 9.150e-7
Identity = 35/82 (42.68%), Postives = 46/82 (56.10%), Query Frame = 0 
Query:  102 YDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKRKRHWTPVIKKRTRSPRDFFEFCVMNPKEQSLAG 183
            + E++ S+L EW+ AH   PYP+ +EK  LAEAT LTT Q+SNWF N+R+R      K+R             NP   SL G
Sbjct:  131 FKEKSRSVLREWY-AHN--PYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRAAEAKERYEXXXXXXXXXXXNPLASSLNG 209
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1652.4420.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2H4ECA4_9PHAE8.430e-7852.27SAMSARA n=1 Tax=Ectocarpus sp. JMC-2016a TaxID=181... [more]
D7FSW8_ECTSI2.700e-5360.34Homeobox domain-containing protein n=1 Tax=Ectocar... [more]
G1QCC7_MYOLU1.690e-740.45SIX homeobox 2 n=2 Tax=Myotis lucifugus TaxID=5946... [more]
UPI001CFDB7892.230e-751.79uncharacterized protein n=1 Tax=Naegleria lovanien... [more]
A0A6A5BGY8_NAEFO2.970e-753.70Homeobox domain-containing protein n=1 Tax=Naegler... [more]
V8NE58_OPHHA5.300e-742.86Homeobox protein SIX2 (Fragment) n=4 Tax=Bifurcata... [more]
H9GNL3_ANOCA6.650e-742.50Homeobox domain-containing protein n=2 Tax=Anolis ... [more]
A0A7L0PI97_9AVES7.910e-749.21SIX1 protein (Fragment) n=1 Tax=Mesembrinibis caye... [more]
A0A7K5L240_VIRAL7.930e-741.38SIX1B protein (Fragment) n=2 Tax=Passeriformes Tax... [more]
A0A6P6E4J4_OCTDE9.150e-742.68homeobox protein SIX2 isoform X1 n=3 Tax=Boreoeuth... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001356Homeobox domainSMARTSM00389HOX_1coord: 94..160
e-value: 7.6E-10
score: 48.7
IPR001356Homeobox domainPROSITEPS50071HOMEOBOX_2coord: 93..156
score: 12.6
NoneNo IPR availableGENE3D1.10.10.60coord: 90..167
e-value: 4.6E-21
score: 76.1
NoneNo IPR availablePANTHERPTHR11850HOMEOBOX PROTEIN TRANSCRIPTION FACTORScoord: 78..196
NoneNo IPR availablePANTHERPTHR11850:SF211HOMEOBOX PROTEIN CEH-20-RELATEDcoord: 78..196
IPR008422Homeobox KN domainPFAMPF05920Homeobox_KNcoord: 113..152
e-value: 2.1E-14
score: 53.1
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 95..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1652contigL-elsbetiae_contig1652:15916..22283 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1652.4420.1mRNA_L-elsbetiae_contig1652.4420.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1652 15916..23018 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1652.4420.1 ID=prot_L-elsbetiae_contig1652.4420.1|Name=mRNA_L-elsbetiae_contig1652.4420.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=784bp
MLCDDLRASCRIGAPAKISGGGGLHPSKPSCWALIEGVGVPKQGLSPSVP
PALRGAPLRRPEGAGQPRHGGGGGGGGGTGSGDDEDSVEESCDSKKRVFS
KYDEETTSILTEWFLAHKRWPYPAAKEKDALAEATKLTTLQISNWFTNKR
KRHWTPVIKKRTRSPRDFFEFCVMNPKEQSLAGKKPQQSPQKQQRHEPPQ
QQHYQQPQQTSMAMSGSNSSSYVPGEMSQRELGPNSGHGMHHQQQMPPVS
GIHHNSSSLAHSVNGSVNGSGDGATGMPFDPRSSGAMDGAAGNRAAMPGT
ANDGGWVDRSRQQQQQQQQQQQQQLQSPQEQQPPHQQQAHHQHQQQHGGG
GPQHPGALAPGLVYAASKAARAAQNDPPNRDQHMPPWMNQPGSTMERRGH
TMVYPHGGFRTGPPGGKAPPPPSGASLPQQGGVDPRDDPRMDPSSVSQYT
TDMRGFDPSSSAYHQAQQNHEALRRRDQAPGAPQAVGPSQQPTGQQQQLP
ANPDDQHQQLQPNPRGSPPTQAAASMMPATPAQQAARAANNTLWVSYRAP
SPRNLASPPAFSQPRASNGGGGGGGGDHAQYPPSSYYAQGPEGAETVHYP
PAPPNPVAGGGVSGGGGGGDGYGAWSGSSAGGRPESFPPVAAFASNGSGS
NGGGTSSGAGAGINGAASGGGGGAGGAVGAAQRPPDATHTAPPEVRGPHQ
PYLQRQQQQQYWDRSLSGRGWPTVGGDVAPLHPPSRVASSDFARAPPSSG
LPPGDNSVAAGPSQSPPLGVRAVTATTASAGWR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001356Homeobox_dom
IPR008422Homeobox_KN_domain
IPR009057Homeobox-like_sf