prot_L-elsbetiae_contig16501.4412.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16501.4412.1
Unique Nameprot_L-elsbetiae_contig16501.4412.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length61
Homology
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: D8LIJ0_ECTSI (MutL protein homolog 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIJ0_ECTSI)

HSP 1 Score: 114 bits (285), Expect = 3.930e-28
Identity = 53/60 (88.33%), Postives = 58/60 (96.67%), Query Frame = 0
Query:    2 QRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            +RSDFILFINDRLVESP+IKK VE+AY+DVLPK+THPFVYLGITMPS HLDVNVHPTKRE
Sbjct:  282 KRSDFILFINDRLVESPSIKKTVESAYKDVLPKNTHPFVYLGITMPSHHLDVNVHPTKRE 341          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A7S2RJJ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJJ5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 3.710e-20
Identity = 41/60 (68.33%), Postives = 50/60 (83.33%), Query Frame = 0
Query:    2 QRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            +R  FILFIN RLVESPAIKK+VE+ Y+D+LP  +HPFVYL + +P RH+DVNV PTKRE
Sbjct:  286 KRPAFILFINHRLVESPAIKKSVESVYKDILPSGSHPFVYLSLELPGRHVDVNVSPTKRE 345          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A7S1TUU4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TUU4_9STRA)

HSP 1 Score: 85.9 bits (211), Expect = 7.180e-20
Identity = 37/56 (66.07%), Postives = 46/56 (82.14%), Query Frame = 0
Query:    6 FILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            FILF+N RLVESPAI++  +TAY D+LP+  HPFVYL + +P  HLDVNVHPTK+E
Sbjct:    2 FILFVNGRLVESPAIRRTFDTAYADLLPRGGHPFVYLALELPPAHLDVNVHPTKKE 57          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A3R7J3A8_9STRA (DNA_mis_repair domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J3A8_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 9.420e-20
Identity = 42/61 (68.85%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            L++S FILFINDRLVE PA+K+A E  Y   LPKSTHPF+YL + +P R+LDVNVHPTKRE
Sbjct:  267 LRKSHFILFINDRLVECPALKRACEYVYSLYLPKSTHPFIYLSMELPPRNLDVNVHPTKRE 327          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: W2R9V5_PHYPN (DNA_mis_repair domain-containing protein n=18 Tax=Phytophthora TaxID=4783 RepID=W2R9V5_PHYPN)

HSP 1 Score: 88.2 bits (217), Expect = 6.130e-19
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            L++S+FILFINDRLVE P++K+A E  Y   LPK+THPF+YL + +P R++DVNVHPTKRE
Sbjct:  268 LKKSNFILFINDRLVECPSLKRACEYVYSLYLPKNTHPFIYLSMDLPPRNIDVNVHPTKRE 328          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A0W8D5T0_PHYNI (DNA mismatch repair protein Mlh1 n=2 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D5T0_PHYNI)

HSP 1 Score: 88.2 bits (217), Expect = 6.130e-19
Identity = 39/61 (63.93%), Postives = 51/61 (83.61%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            L++S+FILFINDRLVE P++K+A E  Y   LPK+THPF+YL + +P R++DVNVHPTKRE
Sbjct:  274 LKKSNFILFINDRLVECPSLKRACEYVYSLYLPKNTHPFIYLSMDLPPRNIDVNVHPTKRE 334          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A0N7L7Q2_PLAHL (Dna mismatch repair protein mlh1 isoform x1 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L7Q2_PLAHL)

HSP 1 Score: 88.2 bits (217), Expect = 6.130e-19
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            LQ+S FILFINDRLVE P++K+A E  Y   LPK+THPF+YL + +P R++DVNVHPTKRE
Sbjct:  284 LQKSTFILFINDRLVECPSLKRACEYVYSLYLPKNTHPFLYLSMELPPRNIDVNVHPTKRE 344          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A662XLR9_9STRA (DNA_mis_repair domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XLR9_9STRA)

HSP 1 Score: 87.8 bits (216), Expect = 8.360e-19
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            L++S FILFIN+RLVE PA+K+A E  Y   LPKSTHPF+YL + +P R++DVNVHPTKRE
Sbjct:  209 LRKSHFILFINNRLVECPALKRACEYVYSLYLPKSTHPFIYLSMELPPRNIDVNVHPTKRE 269          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: A0A3M6VVT9_9STRA (Uncharacterized protein n=2 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VVT9_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 2.140e-18
Identity = 39/61 (63.93%), Postives = 49/61 (80.33%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            L++S+FILFINDRLVE PA+K+A E  Y   LPK THPFVYL + +P R++DVN+HPTK E
Sbjct:  290 LRKSNFILFINDRLVECPALKRACEYVYSLYLPKHTHPFVYLSMELPPRNIDVNIHPTKEE 350          
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Match: M4B4Q9_HYAAE (DNA_mis_repair domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B4Q9_HYAAE)

HSP 1 Score: 86.3 bits (212), Expect = 2.910e-18
Identity = 40/61 (65.57%), Postives = 50/61 (81.97%), Query Frame = 0
Query:    1 LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRHLDVNVHPTKRE 61
            L++S+FILFINDRLVE  A+K+A E  Y   LPK+THPF+YL I +P R++DVNVHPTKRE
Sbjct:  221 LRKSNFILFINDRLVECLALKRACEYVYSLYLPKNTHPFIYLSIELPPRNVDVNVHPTKRE 281          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16501.4412.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIJ0_ECTSI3.930e-2888.33MutL protein homolog 1 n=1 Tax=Ectocarpus siliculo... [more]
A0A7S2RJJ5_9STRA3.710e-2068.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TUU4_9STRA7.180e-2066.07Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A3R7J3A8_9STRA9.420e-2068.85DNA_mis_repair domain-containing protein n=3 Tax=P... [more]
W2R9V5_PHYPN6.130e-1963.93DNA_mis_repair domain-containing protein n=18 Tax=... [more]
A0A0W8D5T0_PHYNI6.130e-1963.93DNA mismatch repair protein Mlh1 n=2 Tax=Phytophth... [more]
A0A0N7L7Q2_PLAHL6.130e-1965.57Dna mismatch repair protein mlh1 isoform x1 n=1 Ta... [more]
A0A662XLR9_9STRA8.360e-1965.57DNA_mis_repair domain-containing protein n=1 Tax=N... [more]
A0A3M6VVT9_9STRA2.140e-1863.93Uncharacterized protein n=2 Tax=Peronospora effusa... [more]
M4B4Q9_HYAAE2.910e-1865.57DNA_mis_repair domain-containing protein n=1 Tax=H... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013507DNA mismatch repair protein, S5 domain 2-likeSMARTSM01340DNA_mis_repair_2coord: 1..61
e-value: 9.1E-4
score: 4.6
IPR013507DNA mismatch repair protein, S5 domain 2-likePFAMPF01119DNA_mis_repaircoord: 3..61
e-value: 5.7E-21
score: 74.4
IPR014721Ribosomal protein S5 domain 2-type fold, subgroupGENE3D3.30.230.10coord: 1..61
e-value: 1.0E-24
score: 88.7
IPR038973DNA mismatch repair protein MutL/Mlh/PmsPANTHERPTHR10073DNA MISMATCH REPAIR PROTEIN MLH, PMS, MUTLcoord: 5..61
NoneNo IPR availablePANTHERPTHR10073:SF12DNA MISMATCH REPAIR PROTEIN MLH1coord: 5..61
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 3..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16501contigL-elsbetiae_contig16501:1187..1369 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16501.4412.1mRNA_L-elsbetiae_contig16501.4412.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16501 1187..1369 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16501.4412.1 ID=prot_L-elsbetiae_contig16501.4412.1|Name=mRNA_L-elsbetiae_contig16501.4412.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=61bp
LQRSDFILFINDRLVESPAIKKAVETAYRDVLPKSTHPFVYLGITMPSRH
LDVNVHPTKRE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013507DNA_mismatch_S5_2-like
IPR014721Ribosomal_S5_D2-typ_fold_subgr
IPR038973MutL/Mlh/Pms
IPR020568Ribosomal_S5_D2-typ_fold