prot_L-elsbetiae_contig1650.4409.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1650.4409.1
Unique Nameprot_L-elsbetiae_contig1650.4409.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length158
Homology
[Close]
BLAST of mRNA_L-elsbetiae_contig1650.4409.1 vs. uniprot
Match: A0A6H5JMR2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JMR2_9PHAE)

HSP 1 Score: 128 bits (321), Expect = 7.750e-35
Identity = 89/169 (52.66%), Postives = 110/169 (65.09%), Query Frame = 0 
Query:    1 MHLSVGRSVAMVSVATALRNASGFVGHLRVGGKYSAGR-MRMS-GSAQASQINHPAPRTSTVPVLDAQAAELKAERLWGMADARKP---LSTERKNGMPEVQMAVGVTARSIIADARG-----EREASNFIEGQGVVSALRRYQYTEQLLEDGDG--DGMDDDGNEYYI 157
            M L VGRS+AM+++A  LRNASGFVG +R     SAG  +RMS G   AS+         +VPVLDAQAAELKAERLWGMADA+KP   + +ER + + EVQ A   T+R       G     +RE  +FIEG+G  SALRRYQY++QLL D D   +  +DDGNEYYI
Sbjct:    1 MQLCVGRSMAMLAIA--LRNASGFVGPVRFTAARSAGVVLRMSSGPTSASR--------PSVPVLDAQAAELKAERLWGMADAQKPGLSVPSERLD-LGEVQAAAESTSRQDSVSMPGMGVFGKRERDDFIEGEGETSALRRYQYSDQLLTDDDSGEESREDDGNEYYI 158
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1650.4409.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JMR2_9PHAE7.750e-3552.66Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1650contigL-elsbetiae_contig1650:16573..18343 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1650.4409.1mRNA_L-elsbetiae_contig1650.4409.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1650 16392..19165 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1650.4409.1 ID=prot_L-elsbetiae_contig1650.4409.1|Name=mRNA_L-elsbetiae_contig1650.4409.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=158bp
MHLSVGRSVAMVSVATALRNASGFVGHLRVGGKYSAGRMRMSGSAQASQI
NHPAPRTSTVPVLDAQAAELKAERLWGMADARKPLSTERKNGMPEVQMAV
GVTARSIIADARGEREASNFIEGQGVVSALRRYQYTEQLLEDGDGDGMDD
DGNEYYI*
back to top