prot_L-elsbetiae_contig1650.4407.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1650.4407.1
Unique Nameprot_L-elsbetiae_contig1650.4407.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length140
Homology
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BLAST of mRNA_L-elsbetiae_contig1650.4407.1 vs. uniprot
Match: A0A6H5KHH6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHH6_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 9.480e-15
Identity = 38/53 (71.70%), Postives = 39/53 (73.58%), Query Frame = 0 
Query:   87 VAGHLATETREKHVFTSHFQDYVECRDRTYFRTRDXXXXXXXAKARDPSRSKK 139
            +AG  ATE RE HVFT  FQDYVE RDRTYFRTRD       AKARDPSRSKK
Sbjct:    1 MAGRRATEARESHVFTRDFQDYVESRDRTYFRTRDHFSDYAEAKARDPSRSKK 53
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1650.4407.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KHH6_9PHAE9.480e-1571.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1650contigL-elsbetiae_contig1650:1777..3786 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1650.4407.1mRNA_L-elsbetiae_contig1650.4407.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1650 1510..3926 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1650.4407.1 ID=prot_L-elsbetiae_contig1650.4407.1|Name=mRNA_L-elsbetiae_contig1650.4407.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=140bp
MTDHQSHDGNQLSFAEREANDLRELHLSATFLTPFAVAATQDNQVWLSNN
QQDYIDHSKGGNNSDMTPVVVKKRSEMASMIGFQGRVAGHLATETREKHV
FTSHFQDYVECRDRTYFRTRDHFSDYAEAKARDPSRSKK*
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