prot_L-elsbetiae_contig1640.4351.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1640.4351.1
Unique Nameprot_L-elsbetiae_contig1640.4351.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length252
Homology
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BLAST of mRNA_L-elsbetiae_contig1640.4351.1 vs. uniprot
Match: D8LFX6_ECTSI (EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFX6_ECTSI)

HSP 1 Score: 57.4 bits (137), Expect = 4.370e-6
Identity = 27/53 (50.94%), Postives = 32/53 (60.38%), Query Frame = 0 
Query:    1 MVNVKSKKCTHHGGCTKVPSYGNAGGKK-EYCRDHAKDEMVDVKSKRCTXHGC 52
            M+NV+ + C H GGC   PSY  AG KK E+C  HA    VDV S+RC   GC
Sbjct:   36 MINVRDRTCCHPGGCPTRPSYAEAGSKKPEFCVLHAPKGTVDVLSRRCARKGC 88
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1640.4351.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFX6_ECTSI4.370e-650.94EsV-1-7 n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1640contigL-elsbetiae_contig1640:20844..21599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1640.4351.1mRNA_L-elsbetiae_contig1640.4351.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1640 20801..22499 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1640.4351.1 ID=prot_L-elsbetiae_contig1640.4351.1|Name=mRNA_L-elsbetiae_contig1640.4351.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MVNVKSKKCTHHGGCTKVPSYGNAGGKKEYCRDHAKDEMVDVKSKRCTHH
GCTKVPSYGKAGGKREYCNGHAKDGMVDMKRKKCTHGGCTSRPSDGKAGD
KAGYYCDHAEDAMANVVEKRCIVHGCTTMANSAAEDTGTRNICIRHAGEG
MIHLAGRPGRGSERSGGPNGTGARASGSTASRASCRGQRGSRVPLPSAAD
ASSGESRKANKRSADSANLTPVRVKSETIDKEVDDKNAAACPKPDTAVVK
R*
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