prot_L-elsbetiae_contig1638.4335.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1638.4335.1
Unique Nameprot_L-elsbetiae_contig1638.4335.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length242
Homology
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: D7G873_ECTSI (Chromodomain-helicase-DNA-binding protein 8 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G873_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 5.010e-47
Identity = 91/124 (73.39%), Postives = 98/124 (79.03%), Query Frame = 0
Query:   26 SSLEEAWERLDTLQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMEDRIGRALREAVQPP 149
            +SL E W+RLD  QK RCVMK+LE LAKEDPLNYFAEPV            S+PLDFSTIKKRQK+G Y+K GFS L EDISTVYRNAQLYNQDESDCFIVAQKGLDSM DR+GRAL EA Q P
Sbjct: 3396 TSLGEGWDRLDDQQKSRCVMKALELLAKEDPLNYFAEPV------------SNPLDFSTIKKRQKKGRYAKLGFSALREDISTVYRNAQLYNQDESDCFIVAQKGLDSMADRLGRALTEAAQHP 3507          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: A0A811N4V5_9POAL (Hypothetical protein n=1 Tax=Miscanthus lutarioriparius TaxID=422564 RepID=A0A811N4V5_9POAL)

HSP 1 Score: 69.7 bits (169), Expect = 5.630e-10
Identity = 35/103 (33.98%), Postives = 54/103 (52.43%), Query Frame = 0
Query:   34 RLDTLQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMED 136
            R   L  ++ +   LE L K+D    FAEPVD   +P Y DV+ HP+DF T++K+  R  Y  + F +  +D+  +  NA  YN  ++  F  A+K    + D
Sbjct:  208 RTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFGTVRKKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYFRQARKKFQELRD 308          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: I1GU18_BRADI (Bromo domain-containing protein n=1 Tax=Brachypodium distachyon TaxID=15368 RepID=I1GU18_BRADI)

HSP 1 Score: 68.6 bits (166), Expect = 1.380e-9
Identity = 33/91 (36.26%), Postives = 51/91 (56.04%), Query Frame = 0
Query:   34 RLDTLQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCF 124
            R   L  ++ V   L+ L K+D    FAEPVD+  +P Y DV+ HP+DF T+K++  R  Y  + F +  +D+  +  NA LYN  ++  F
Sbjct:  197 RTTPLPDRKAVDMILDKLQKKDTYGVFAEPVDLDELPDYHDVIEHPMDFGTVKRKLARNAY--RSFEQFEDDVFLICSNAMLYNAPDTIYF 285          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: A0A7S3TUP4_EMIHU (Hypothetical protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3TUP4_EMIHU)

HSP 1 Score: 67.8 bits (164), Expect = 1.890e-9
Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = 0
Query:   47 SLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGL 131
            +L+ L   DPL YFA+PVD   +P YR V+  P+DFST++ R +RG YS     +L +D   + RNA ++N   ++ + VA K L
Sbjct:  357 ALDELQALDPLGYFAQPVDDEAIPEYRTVIPDPMDFSTMRVRLRRGEYSSP--LQLADDFVLLCRNALVFNPSATNPYRVAAKSL 439          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: UPI0006B08306 (peregrin-like isoform X1 n=2 Tax=Limulus polyphemus TaxID=6850 RepID=UPI0006B08306)

HSP 1 Score: 67.8 bits (164), Expect = 2.490e-9
Identity = 41/110 (37.27%), Postives = 58/110 (52.73%), Query Frame = 0
Query:   37 TLQKKRCVMKS-LEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMEDRIGRALREA 145
            TL   R ++   L+ L  +D  + FAEPVDV  VP Y DV+ HP+DFST+KK+     YS   FS    D   +  N  +YN  ++  +  AQK    + ++ G  LR A
Sbjct:  623 TLNPLRMMLNEILDQLKAKDIASIFAEPVDVKEVPDYLDVIKHPMDFSTMKKKLNDHQYS--NFSDFEADFHLIINNCLMYNAKDTIFYKAAQK----LREQGGAILRHA 726          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: C4IZL5_MAIZE (Bromo domain-containing protein n=12 Tax=Zea mays TaxID=4577 RepID=C4IZL5_MAIZE)

HSP 1 Score: 66.6 bits (161), Expect = 3.560e-9
Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   38 LQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMEDRIGRALRE 144
            L  K+ ++  L+ L K+D    F+EPVD   +P Y D+V HP+DFSTI+K+  +G YS     +  +D+  +  NA  YN  ++  +  A +G+  +  +    LR+
Sbjct:  118 LPNKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYHDIVKHPMDFSTIRKKLDKGAYS--NLEQFEDDVFLISTNAMCYNSPDTIYYRQA-RGIQEIAKKDFENLRQ 221          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: A0A1D6EWT5_MAIZE (DNA-binding bromodomain-containing protein n=2 Tax=Zea mays TaxID=4577 RepID=A0A1D6EWT5_MAIZE)

HSP 1 Score: 67.0 bits (162), Expect = 3.980e-9
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0
Query:   34 RLDTLQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCF 124
            R   L  ++ +   LE L K+D    FAEPVD   +P Y DV+ HP+DFST++K+  R  Y  + F +  +D+  +  NA  YN  ++  F
Sbjct:  212 RTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFSTVRKKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYF 300          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: A0A3L6FTN9_MAIZE (Bromodomain-containing protein 9 n=8 Tax=Zea mays TaxID=4577 RepID=A0A3L6FTN9_MAIZE)

HSP 1 Score: 67.0 bits (162), Expect = 4.600e-9
Identity = 33/91 (36.26%), Postives = 50/91 (54.95%), Query Frame = 0
Query:   34 RLDTLQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCF 124
            R   L  ++ +   LE L K+D    FAEPVD   +P Y DV+ HP+DFST++K+  R  Y  + F +  +D+  +  NA  YN  ++  F
Sbjct:  212 RTTPLPDRKALEMILEKLQKKDTYGVFAEPVDPEELPDYHDVIEHPMDFSTVRKKLARNAY--RSFEQFEDDVFLICSNAMQYNAPDTIYF 300          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: A0A804MQH7_MAIZE (Bromo domain-containing protein n=8 Tax=Zea mays TaxID=4577 RepID=A0A804MQH7_MAIZE)

HSP 1 Score: 66.6 bits (161), Expect = 5.160e-9
Identity = 35/107 (32.71%), Postives = 59/107 (55.14%), Query Frame = 0
Query:   38 LQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMEDRIGRALRE 144
            L  K+ ++  L+ L K+D    F+EPVD   +P Y D+V HP+DFSTI+K+  +G YS     +  +D+  +  NA  YN  ++  +  A +G+  +  +    LR+
Sbjct:  118 LPNKKLLLFILDRLQKKDTYGVFSEPVDPEELPDYHDIVKHPMDFSTIRKKLDKGAYS--NLEQFEDDVFLISTNAMCYNSPDTIYYRQA-RGIQEIAKKDFENLRQ 221          
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Match: A0A1E5VIB2_9POAL (Bromo domain-containing protein n=2 Tax=Paniceae TaxID=147428 RepID=A0A1E5VIB2_9POAL)

HSP 1 Score: 66.6 bits (161), Expect = 5.170e-9
Identity = 44/148 (29.73%), Postives = 74/148 (50.00%), Query Frame = 0
Query:    4 GRAEDEMDEWMGDYGGGA-GVTSSSLEEAWERLDT------LQKKRCVMKSLEYLAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFSKLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMEDRIGRALRE 144
            GR E ++   MG + G A G  +    +  E L        L  K+ ++  L+ L K+D    F+EPVD   +P Y D++ HP+DFSTI+K+  +G YS     +  +D+  +  NA  YN  ++  +  A +G+  +  +    LR+
Sbjct:   80 GRREKKLRLVMGLHDGSAKGEKTRKATDGREELSDSGPTTPLPNKKLLIFILDRLQKKDTYGVFSEPVDPEELPDYHDIIKHPMDFSTIRKKLDKGAYS--NLEQFEDDVFLISSNAMCYNSPDTIYYRQA-RGIQEIAKKDFENLRQ 224          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1638.4335.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G873_ECTSI5.010e-4773.39Chromodomain-helicase-DNA-binding protein 8 n=2 Ta... [more]
A0A811N4V5_9POAL5.630e-1033.98Hypothetical protein n=1 Tax=Miscanthus lutariorip... [more]
I1GU18_BRADI1.380e-936.26Bromo domain-containing protein n=1 Tax=Brachypodi... [more]
A0A7S3TUP4_EMIHU1.890e-941.18Hypothetical protein (Fragment) n=2 Tax=Emiliania ... [more]
UPI0006B083062.490e-937.27peregrin-like isoform X1 n=2 Tax=Limulus polyphemu... [more]
C4IZL5_MAIZE3.560e-932.71Bromo domain-containing protein n=12 Tax=Zea mays ... [more]
A0A1D6EWT5_MAIZE3.980e-936.26DNA-binding bromodomain-containing protein n=2 Tax... [more]
A0A3L6FTN9_MAIZE4.600e-936.26Bromodomain-containing protein 9 n=8 Tax=Zea mays ... [more]
A0A804MQH7_MAIZE5.160e-932.71Bromo domain-containing protein n=8 Tax=Zea mays T... [more]
A0A1E5VIB2_9POAL5.170e-929.73Bromo domain-containing protein n=2 Tax=Paniceae T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001487BromodomainPRINTSPR00503BROMODOMAINcoord: 69..85
score: 38.87
coord: 105..124
score: 28.26
IPR001487BromodomainSMARTSM00297bromo_6coord: 33..143
e-value: 2.3E-10
score: 50.4
IPR001487BromodomainPFAMPF00439Bromodomaincoord: 48..128
e-value: 1.1E-14
score: 54.3
IPR001487BromodomainPROSITEPS50014BROMODOMAIN_2coord: 60..124
score: 14.762
IPR036427Bromodomain-like superfamilyGENE3D1.20.920.10coord: 31..147
e-value: 2.5E-20
score: 74.1
IPR036427Bromodomain-like superfamilySUPERFAMILY47370Bromodomaincoord: 35..152
NoneNo IPR availablePANTHERPTHR22881:SF11SWI/SNF NUCLEOSOME REMODELING COMPLEX COMPONENTcoord: 37..177
NoneNo IPR availablePANTHERPTHR22881BROMODOMAIN CONTAINING PROTEINcoord: 37..177

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1638contigL-elsbetiae_contig1638:13821..16623 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1638.4335.1mRNA_L-elsbetiae_contig1638.4335.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1638 13803..16623 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1638.4335.1 ID=prot_L-elsbetiae_contig1638.4335.1|Name=mRNA_L-elsbetiae_contig1638.4335.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=242bp
MPYGRAEDEMDEWMGDYGGGAGVTSSSLEEAWERLDTLQKKRCVMKSLEY
LAKEDPLNYFAEPVDVSMVPGYRDVVSHPLDFSTIKKRQKRGNYSKQGFS
KLWEDISTVYRNAQLYNQDESDCFIVAQKGLDSMEDRIGRALREAVQPPP
HSHGRAGGTIRKKPSLHQGGGGGGGASHGAGEEFRGESGMGEEDSEDESM
EEQDNESDEDFEAPASAKRGPGPGPGRPAAAAAPPPPRAPTR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001487Bromodomain
IPR036427Bromodomain-like_sf