prot_L-elsbetiae_contig1628.4291.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig1628.4291.1
Unique Nameprot_L-elsbetiae_contig1628.4291.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length922
Homology
BLAST of mRNA_L-elsbetiae_contig1628.4291.1 vs. uniprot
Match: A0A6H5JNI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNI7_9PHAE)

HSP 1 Score: 704 bits (1816), Expect = 3.010e-238
Identity = 490/850 (57.65%), Postives = 558/850 (65.65%), Query Frame = 0
Query:   98 SKTGSTPKRKRLLRLEGGDLVVIPTNIYKQAGGLKLDITLGGFRIDGEKCTLKNRAYNFGVVPGFTRENLLALSAFRDTLLPTDRSAA-TSIHTIIAAEAITRYDEEHQKPPETSSLAEESSYYGVGGWIPDSRVIHMTFAGSKMELKVRAGDLRAVDRPLQCKLALEALKSDPRILQGKLEPAPPAAEVYGTDGTDAVGPEPGATGFARGLEGAQSALSGCRSGAR---AAGXXXXXXXXXXXXXAEFSSLFGGAAAAAV-GLGDCGGAGEDVYYVPELDSTQKHRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSVEYDLPLHVQCVGGKQCSPSLRLKVPLTGFLVNGEEAPASEIMVANGLDVTKENLLALRACRDAVLANFAGPELVKRVVAGEVFRVWNKRRGESVWASRRAEDDAAXXXXXXXXXXXXXXXXXDLPVDVVPTPTASSESLLLPLGGEPEV---------------GMVLXXXXXXXXXXXXXQQLANEPSTQEEASALAGE---------------GGALLSAAE-EADYAVDADRGSGGAAARNSHLVVAPAATRAGAARIMVTA--AGGVAIRPPAFASDDVVTLSSPASFPGAPRIELRMTVGELRRARQTRTTELKRLVAAMLQDPNVQAGELEVFDDDMSSPAITKNNLSGAXXXXXXXXXXGVVNRANSHTAVALLASGQENRGLPSRSITSGGCGXXXXXXXXVG-CGLDVGSKVAEKWGATLL-QRGKRARTTGGWAIDPSGAIVAXXXXXXXXXXXXXXXXXXXXXXXQRRQLWALAIRENELLYEREKEAARKEYDARQQELLRWMVDEEAGRHDALGGDAGP 907
            +K  + PKRKRL+RLE G+LVVIPTNIY+QAGG+KLDITLGGFRID EKCTLKNRAYNFGV+PGFTRENLLAL AFRDTLLPTDRS   +SIHTIIAAEA+ RYDEEH KPPE SS AEESS+YG G WIPDSRVIHMT+ GS MEL+V+AGDLRAV+RPLQCK+ALEALKSDP++L+GKLEPAPP+ +VYG+ G + VGPEPGATGF+R  E  Q A S  RSG R     G  XX         AEFS LFGGAAA A  G  D    G       +LDST  HRXXXXXXXXXXXXXX               +VEYDLPLHVQ V GKQC PSLRLKVPLTGF+V+GE  P+SE++VA+GLD+T++NLLALRAC DAVLANFA P+LVKRV+AGEVFRVW +RRGE + A R A+                      +P DVVP     S S +L  GG  +                    XXXXXXXXXXXXX    NEPS +   +A   E               GG +LS+   E D    ++ G GGA A  SHLVV PA TR G A  + TA   GG+ +R  A  +DDV TLSSP SFPG PRIELRMT  ELRRARQT+   LK L+A MLQD  VQAGEL+V    MSSPAIT++NLSGA XXXXXXXXX VV RAN HT  ALL SG+E R   SRS ++            VG  G D+G+KVAE+WGATLL  R KRA+      + P     A                       QRRQLWALAIRENEL +ER KE  R EYD RQ+EL+ WMVDEEAGRHD L G AGP
Sbjct:   95 TKPVAAPKRKRLMRLESGELVVIPTNIYRQAGGVKLDITLGGFRIDNEKCTLKNRAYNFGVLPGFTRENLLALRAFRDTLLPTDRSKMPSSIHTIIAAEAMIRYDEEHVKPPEGSSFAEESSHYGAGRWIPDSRVIHMTYTGSDMELRVKAGDLRAVNRPLQCKMALEALKSDPKVLEGKLEPAPPSVDVYGSGGAETVGPEPGATGFSRSPESLQPASSDPRSGGRRVAGGGEGXXSRAPAGGANAEFSLLFGGAAAFANDGFVDDHDNGRP--RTKDLDSTSMHRXXXXXXXXXXXXXXTEEGGEGGEG-----AVEYDLPLHVQIVEGKQCRPSLRLKVPLTGFMVDGEIVPSSELVVAHGLDITRKNLLALRACCDAVLANFAAPDLVKRVIAGEVFRVWTRRRGEDMRARRSADAILGTAQSPGVSELDESPPAPAMPTDVVPLTVVDSGSPVLLEGGGSQTQTEAMQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNEPSGEGAVAAXXXEMXXXXXXXXXXXXXTGGTMLSSPPAEVDLDTASEGGDGGAPAI-SHLVVTPAITR-GTAPTVATAPPVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKTLLATMLQDAKVQAGELDVVHG-MSSPAITRSNLSGAAXXXXXXXXXXVVTRANLHTT-ALLVSGKEEREKASRSNSNSAV-------RNVGYSGRDIGTKVAERWGATLLLHRVKRAKAVDYSPLGPCEVAAAPGDISVMPITKASS---------QRRQLWALAIRENELRHERMKEDGRSEYDVRQKELVSWMVDEEAGRHDHLDGTAGP 917          
BLAST of mRNA_L-elsbetiae_contig1628.4291.1 vs. uniprot
Match: D8LTH9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTH9_ECTSI)

HSP 1 Score: 235 bits (599), Expect = 1.480e-66
Identity = 169/304 (55.59%), Postives = 190/304 (62.50%), Query Frame = 0
Query:  610 VDADRGSGGA---AARNSHLVVAPAATRAGAARIMVT-AAGGVAIRPPAFASDDVVTLSSPASFPGAPRIELRMTVGELRRARQTRTTELKRLVAAMLQDPNVQAGELEVFDDDMSSPAITKNNLSGAXXXXXXXXXXGVVNRANSHTAVALLASGQENRGLPSRSITSGGCGXXXXXXXXVG-CGLDVGSKVAEKWGATLL-QRGKRARTTGGWAIDPSGAIVAXXXXXXXXXXXXXXXXXXXXXXXQRRQLWALAIRENELLYEREKEAARKEYDARQQELLRWMVDEEAGRHDALGGDAGP 907
            VD+D  S G    A  NSHLVV PA TRA AA +      GG+ +R  A  +DDV TLSSP SFPG PRIELRMT  ELRRARQT+   LK+L+A MLQD  VQAGEL+V    MS PAIT++NLSGA XXXXXXXXX  V RAN HT  ALL SG+E R   S+S ++            VG  G D+GSKVAE+WGATLL  R KRAR      + P G   A                       QRRQLWALAIRENEL +ER KE +R EYD RQ+ELL WMVDEEAGRHD L G AGP
Sbjct:    9 VDSDTVSEGGDIGAPANSHLVVTPAITRAAAATVATAPTVGGLGVRSAALGNDDVFTLSSPTSFPGGPRIELRMTASELRRARQTKAAALKKLLATMLQDAKVQAGELDVVHG-MSGPAITRSNLSGAAXXXXXXXXXXXVTRANLHTT-ALLVSGKEEREKASKSTSNSAV-------RNVGYSGRDIGSKVAERWGATLLLHRVKRARAADSSPLGPCGVAAAPGDISVVPITTASS---------QRRQLWALAIRENELRHERMKEDSRSEYDVRQKELLSWMVDEEAGRHDHLDGTAGP 294          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig1628.4291.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JNI7_9PHAE3.010e-23857.65Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LTH9_ECTSI1.480e-6655.59Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR45725FAMILY NOT NAMEDcoord: 7..373
coord: 313..916
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..921
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..16

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig1628contigL-elsbetiae_contig1628:14902..22455 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig1628.4291.1mRNA_L-elsbetiae_contig1628.4291.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig1628 14782..22792 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig1628.4291.1 ID=prot_L-elsbetiae_contig1628.4291.1|Name=mRNA_L-elsbetiae_contig1628.4291.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=922bp
MDSAHELAIAAAVAAVEAAAEAEAAAEAPPAPPAPAAYPNEGAGPSNEVG
SAGVVLDAHRASAAASVTTPAAAAAFTAAAAAAGLSLGTASNGRGTGSKT
GSTPKRKRLLRLEGGDLVVIPTNIYKQAGGLKLDITLGGFRIDGEKCTLK
NRAYNFGVVPGFTRENLLALSAFRDTLLPTDRSAATSIHTIIAAEAITRY
DEEHQKPPETSSLAEESSYYGVGGWIPDSRVIHMTFAGSKMELKVRAGDL
RAVDRPLQCKLALEALKSDPRILQGKLEPAPPAAEVYGTDGTDAVGPEPG
ATGFARGLEGAQSALSGCRSGARAAGGGRGGRASLGGAHAEFSSLFGGAA
AAAVGLGDCGGAGEDVYYVPELDSTQKHRKKKKKKKTVVIPVAAANGAAG
GEGGGGGGSVEYDLPLHVQCVGGKQCSPSLRLKVPLTGFLVNGEEAPASE
IMVANGLDVTKENLLALRACRDAVLANFAGPELVKRVVAGEVFRVWNKRR
GESVWASRRAEDDAAAAAAARATTATTAAAAADLPVDVVPTPTASSESLL
LPLGGEPEVGMVLIQQQHQHQHQQPQQQLANEPSTQEEASALAGEGGALL
SAAEEADYAVDADRGSGGAAARNSHLVVAPAATRAGAARIMVTAAGGVAI
RPPAFASDDVVTLSSPASFPGAPRIELRMTVGELRRARQTRTTELKRLVA
AMLQDPNVQAGELEVFDDDMSSPAITKNNLSGAAAAAAAAAAAGVVNRAN
SHTAVALLASGQENRGLPSRSITSGGCGGGGGGGGGVGCGLDVGSKVAEK
WGATLLQRGKRARTTGGWAIDPSGAIVAAAAAPGGGGGDVSMTIPTTAAS
SQRRQLWALAIRENELLYEREKEAARKEYDARQQELLRWMVDEEAGRHDA
LGGDAGPPPPPPPPPQAVVGE*
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