prot_L-elsbetiae_contig16146.4224.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16146.4224.1
Unique Nameprot_L-elsbetiae_contig16146.4224.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length252
Homology
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: D8LJN1_ECTSI (Rhomboid domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJN1_ECTSI)

HSP 1 Score: 297 bits (760), Expect = 2.780e-96
Identity = 168/249 (67.47%), Postives = 198/249 (79.52%), Query Frame = 0
Query:    6 HVCV-PPFVLGTLCRNGDIQLRRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAILHLMNLLTGATLFSGRQRPSYTYSSGASSAPRASGRDGGYDRGRMTAAQQQSPLP-SAYDVASDPGAAEEAAIQEALRRSMVD 252
            +VC+ P  +L T  R G++++RRLL+SPFVHGDD HL+ NM SFLLKGV+LELTMGTQAFAGLL+F+LLASQ LM+L +W LLVVFDVPSPM AC VGFSGVLFAL YVLSRRSPGVT VMGF V  RYA WLELVLISV+V NASFLGHLCGILAG+LYVEVP +L ++NL TG +L++ R+  SYTY+SG S   RAS        G     +QQSP P +AYD+ SDP A EEAA+QEALRRS++D
Sbjct:   98 NVCLLPASILDTYERTGEVEIRRLLMSPFVHGDDMHLYYNMASFLLKGVSLELTMGTQAFAGLLSFSLLASQTLMMLSAWVLLVVFDVPSPMHACAVGFSGVLFALKYVLSRRSPGVTSVMGFSVHTRYATWLELVLISVMVPNASFLGHLCGILAGVLYVEVPIVLRVVNLFTGISLYNNRRGRSYTYNSGTSG--RAS------PEGARRETRQQSPNPPAAYDIDSDPEA-EEAALQEALRRSLLD 337          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A7S2TY11_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TY11_9EUKA)

HSP 1 Score: 135 bits (341), Expect = 4.920e-35
Identity = 82/186 (44.09%), Postives = 107/186 (57.53%), Query Frame = 0
Query:    5 PHVCVPPFVLGTLCRNGDIQLRRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAILHLMNLLTGATLFSGRQRPS 190
            P VC+ P     +   GD   +RL++S F H DD HL+ NM S L KGV LE   GT+ F G+    L  S    V  +W +  +    S MQ C VGFS VLFA   VL+  SP +T V G  V L+YA WLELV+IS++  NASFLGHLCGILAG++YV     + L ++ + A+  +    PS
Sbjct:   60 PDVCMHP---AKILFGGD--WKRLVLSAFYHADDYHLYYNMSSLLWKGVQLEQQFGTEEFIGMTLVLLGLSHSFYVAAAWIMYTLGISSSSMQTCAVGFSAVLFAYKVVLNFNSPRMTNVYGISVPLKYACWLELVMISIITPNASFLGHLCGILAGLVYVTGGRAIMLGSIFSAASSSAPASAPS 240          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A836CHG7_9STRA (Rhomboid domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHG7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 9.090e-35
Identity = 108/253 (42.69%), Postives = 137/253 (54.15%), Query Frame = 0
Query:    7 VCVPPFVLGTLCRNGDIQLRRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMG-FQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAILHLMNLLTGATLFSGRQRPSY--TYSSGASSAPRASGRDGGYDRGRMTAAQQQSPLPSAY--DVASDPGAAE----EAAIQEALRRSM 250
            VC+ P  +     NG++   RL  S  +HGDD HL+ NMGS L+KGV+LE TMGT AFA L+ F    S  L+V+V+ A + +   P    +C VGFS VLFAL YV + R P     +G F +  R+A W EL+LI V+V NASFLGHLCGILAG+L+V   A++      T A L  GR  P    TY    S    A G  G                P A+    ASD  A E    +A +QEALRRS+
Sbjct:   69 VCLKPAKVVKELLNGEVDAVRLFGSALIHGDDLHLWYNMGSLLMKGVSLETTMGTPAFALLVVFLWALSHTLVVVVALASVYLGFDPG-FNSCMVGFSAVLFALKYVAAFREPARPTPVGYFLIDSRWASWAELILIQVVVPNASFLGHLCGILAGVLWVHGGAVV-AYTAKTLAPLGVGRGGPGAYDTYGGRGSRYTYARGTSGTAAAXXXXXXXXXXXRPPAFAPGAASDSAAFEVEDADAQLQEALRRSL 319          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A225X2V2_9STRA (Serine protease n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225X2V2_9STRA)

HSP 1 Score: 134 bits (336), Expect = 6.910e-34
Identity = 75/158 (47.47%), Postives = 102/158 (64.56%), Query Frame = 0
Query:   27 RLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAILHLMNLLTGATLFS 184
            R++ S  +HGDD HL+ NM SFL KG  LE  +G+  F   + + LL   +L+V+V+  L   F +P P+  C+VGFSGVLFAL  +L+  SP  + V GFQV  +YA WLELV+I  LV  +SF+GH+CGILAG ++V  PA+   M+  TGA   S
Sbjct:   80 RIVASALIHGDDWHLYHNMVSFLWKGYNLEYKLGSVRFLLTVGYLLLLCHVLVVVVALVLATRFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAYSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVFSPAMQTAMS--TGAHTIS 235          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A482UPC4_9ARCH (Rhomboid family intramembrane serine protease (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UPC4_9ARCH)

HSP 1 Score: 129 bits (323), Expect = 6.800e-33
Identity = 73/166 (43.98%), Postives = 106/166 (63.86%), Query Frame = 0
Query:   10 PPFVLGTLCRNGDIQLRRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVP-----SPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAI 170
            P  ++ +L  N  I   R++++ F+H DD HL+ NM S L KGV LE   G+  F  L+ ++LLAS +L+V++S+   VV+ V      S   +C +GFS VLF+L YVL++ SP  T ++GFQV  ++A W ELVL S+L    SF+GHL GILAG LYV + ++
Sbjct:   72 PSLIVSSLTNNHSILWNRIVLAGFMHADDMHLYYNMLSLLWKGVQLEQQFGSFQFGILVVYSLLASHILLVVMSY---VVYAVTQNIHISSYDSCAIGFSAVLFSLKYVLNQNSPAYTSILGFQVPSKWAAWAELVLASLLSPQVSFIGHLAGILAGYLYVHMDSV 234          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: F0W223_9STRA (Serine protease family S54 putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W223_9STRA)

HSP 1 Score: 130 bits (327), Expect = 7.230e-33
Identity = 75/144 (52.08%), Postives = 94/144 (65.28%), Query Frame = 0
Query:   27 RLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAI 170
            RL+ S F HGDD HL+ NM SFL KG  LE  MG+  FA LL + LL S  L+VL S+ +  +   P     C++GFS VLF L  VL+ +SP  + + GFQV  +YA WLELVLI VLV +ASFLGHLCGI+AG  ++   AI
Sbjct:   78 RLIGSAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYHFACLLIYLLLVSHGLIVLASYLIFKLQHNPHAWTQCSLGFSAVLFGLKVVLNSKSPNTSNIYGFQVPTKYAAWLELVLIHVLVPDASFLGHLCGIVAGYSWISHAAI 221          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A024G5H6_9STRA (Rhomboid domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G5H6_9STRA)

HSP 1 Score: 129 bits (325), Expect = 7.250e-33
Identity = 75/144 (52.08%), Postives = 93/144 (64.58%), Query Frame = 0
Query:   27 RLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAI 170
            RL+ + F HGDD HL+ NM SFL KG  LE  MG+  FA +LA+ LL S  L+VL S+ +L     P     C++GFS VLF L  VL+  SP  T + GF V  +YA WLELVLI VLV NASFLGHLCGI+AG  ++   A+
Sbjct:   49 RLIGAAFFHGDDIHLYHNMVSFLWKGYQLESKMGSYRFACVLAYLLLVSHGLIVLTSYLILKYQHNPHAWTQCSLGFSAVLFGLKVVLNSESPNTTSIYGFHVPTKYAAWLELVLIHVLVPNASFLGHLCGIVAGYSWILHSAL 192          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A329RKV0_9STRA (Rhomboid domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RKV0_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.860e-32
Identity = 73/156 (46.79%), Postives = 98/156 (62.82%), Query Frame = 0
Query:   25 LRRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAILHLMNLLTGA 180
            L R+++S  +H DD HL+ NM SFL KG  LE   G+  F   + + LL   +L+V+V+  L   F +P P+  C+VGFSGVLFAL  +L+  SP  + V GF+V  +YA WLELV+I  LV  +SF GH+CGILAG ++V  PAI   M   T A
Sbjct:   80 LTRIVVSGLIHVDDWHLYHNMISFLWKGYNLEYKAGSVRFLLTVGYLLLLCHVLVVVVALVLATGFQMPGPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFRVPTKYAAWLELVVIHFLVPRSSFTGHMCGILAGYIFVYSPAIQSAMTSGTSA 235          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A6A4D013_9STRA (Rhomboid domain-containing protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A4D013_9STRA)

HSP 1 Score: 130 bits (326), Expect = 1.900e-32
Identity = 71/155 (45.81%), Postives = 100/155 (64.52%), Query Frame = 0
Query:   26 RRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAILHLMNLLTGA 180
            +RL+ S  +H DD HL+ NM SFL KG  LE  +G+  F   + + L+   +L+V+V+  L   F +P+P+  C+VGFSGVLFAL  +L+  SP  + V GFQV  +YA WLELV+I  LV  +SF+GH+CGILAG ++V  PA+   M  +  A
Sbjct:   82 KRLVASGLIHVDDWHLYHNMISFLWKGCNLEYKLGSVRFLLTVGYLLVLCHVLVVMVALILATGFQMPAPLHQCSVGFSGVLFALKVLLNHNSPAFSSVYGFQVPTKYAAWLELVVIHFLVPRSSFMGHMCGILAGYIFVYSPAMQSAMTSVARA 236          
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Match: A0A7I4ESY3_PHYPA (RanBP2-type domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4ESY3_PHYPA)

HSP 1 Score: 129 bits (325), Expect = 2.020e-32
Identity = 77/150 (51.33%), Postives = 96/150 (64.00%), Query Frame = 0
Query:   22 DIQLRRLLISPFVHGDDTHLFSNMGSFLLKGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQA-CTVGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNASFLGHLCGILAGILYVEVPAI 170
            D  L+RL +S F H D+THL  NM S + KGV LE +MG+Q FAGLLA  L  S  L+V  S  L  + D P+   + C VGFSGVLFAL  VL+  SP  T V G  V  RYA W+EL++I + V   SFLGHLCGILAG++Y+  P +
Sbjct:   29 DWDLKRLFLSAFYHVDETHLVYNMISLMWKGVQLEGSMGSQKFAGLLAVLLGLSSSLVVASSSLLAFLADSPTSFYSECAVGFSGVLFALKVVLNYNSPSHTNVYGILVPSRYAAWVELLVIQMFVPGTSFLGHLCGILAGVIYMNTPEV 178          
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16146.4224.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LJN1_ECTSI2.780e-9667.47Rhomboid domain-containing protein n=2 Tax=Ectocar... [more]
A0A7S2TY11_9EUKA4.920e-3544.09Hypothetical protein n=1 Tax=Lotharella oceanica T... [more]
A0A836CHG7_9STRA9.090e-3542.69Rhomboid domain-containing protein n=1 Tax=Tribone... [more]
A0A225X2V2_9STRA6.910e-3447.47Serine protease n=1 Tax=Phytophthora megakarya Tax... [more]
A0A482UPC4_9ARCH6.800e-3343.98Rhomboid family intramembrane serine protease (Fra... [more]
F0W223_9STRA7.230e-3352.08Serine protease family S54 putative n=1 Tax=Albugo... [more]
A0A024G5H6_9STRA7.250e-3352.08Rhomboid domain-containing protein n=1 Tax=Albugo ... [more]
A0A329RKV0_9STRA1.860e-3246.79Rhomboid domain-containing protein n=2 Tax=Phytoph... [more]
A0A6A4D013_9STRA1.900e-3245.81Rhomboid domain-containing protein n=3 Tax=Phytoph... [more]
A0A7I4ESY3_PHYPA2.020e-3251.33RanBP2-type domain-containing protein n=2 Tax=Phys... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035952Rhomboid-like superfamilyGENE3D1.20.1540.10coord: 14..169
e-value: 2.0E-12
score: 49.2
IPR022764Peptidase S54, rhomboid domainPFAMPF01694Rhomboidcoord: 24..165
e-value: 3.4E-17
score: 62.9
NoneNo IPR availablePANTHERPTHR43066RHOMBOID-RELATED PROTEINcoord: 24..220
NoneNo IPR availablePANTHERPTHR43066:SF1RHOMBOID-RELATED PROTEIN 4coord: 24..220
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 90..94
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 95..114
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 135..163
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 186..252
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 164..168
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..89
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..63
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 169..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 115..134
NoneNo IPR availableSUPERFAMILY144091Rhomboid-likecoord: 23..165
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 162..184
NoneNo IPR availableTMHMMTMhelixcoord: 136..158

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16146contigL-elsbetiae_contig16146:1523..2632 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16146.4224.1mRNA_L-elsbetiae_contig16146.4224.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16146 1523..2632 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16146.4224.1 ID=prot_L-elsbetiae_contig16146.4224.1|Name=mRNA_L-elsbetiae_contig16146.4224.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=252bp
MRFRPHVCVPPFVLGTLCRNGDIQLRRLLISPFVHGDDTHLFSNMGSFLL
KGVALELTMGTQAFAGLLAFTLLASQLLMVLVSWALLVVFDVPSPMQACT
VGFSGVLFALTYVLSRRSPGVTRVMGFQVQLRYAIWLELVLISVLVHNAS
FLGHLCGILAGILYVEVPAILHLMNLLTGATLFSGRQRPSYTYSSGASSA
PRASGRDGGYDRGRMTAAQQQSPLPSAYDVASDPGAAEEAAIQEALRRSM
VD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035952Rhomboid-like_sf
IPR022764Peptidase_S54_rhomboid_dom