prot_L-elsbetiae_contig16.4132.1 (polypeptide) Laminarionema elsbetiae ELsaHSoW15

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_L-elsbetiae_contig16.4132.1
Unique Nameprot_L-elsbetiae_contig16.4132.1
Typepolypeptide
OrganismLaminarionema elsbetiae ELsaHSoW15 (Laminarionema elsbetiae ELsaHSoW15)
Sequence length311
Homology
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BLAST of mRNA_L-elsbetiae_contig16.4132.1 vs. uniprot
Match: D7FLM3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLM3_ECTSI)

HSP 1 Score: 354 bits (908), Expect = 2.300e-119
Identity = 202/312 (64.74%), Postives = 228/312 (73.08%), Query Frame = 0 
Query:    1 MGFAARKCMTPGEGHPQLAHAKRHDGGGPGPGTYATGDSAVMGHRGGTFAAQDERRRAAAALEMTVCRLKTLEWRIEFIRRGLREPEGLRPGQALLVKVQSGRELERIEAKASRLRSEVERLVSLATAADAKRDPLPGASLG--GDANGCRGXXXXXXXXXXPATTAGVGGAGSGKRQACGQGSDRFYDPVPSTASFRDSPGPGTYDV---EGAFGKASLRRSPSFDLMQRRVVGERAAPGRSLASLRLHATTAGDPGGGGEDDGFGGTKRGDGLGAPFHAYMADAGPGCYTPDMCAPPLPNEARRGRGRGG 307
            MG  ARKCMTPG+ HPQL HAKR DG GPGPG YATGDSAVMGH GGTFAA D RR A AALEM V RLKTLEWRIEFIRRG REPE LRPGQ+L+V+ QSG+EL R+E KASRLRSE++RL  LA +  + RDPLPGAS+G  G A G             PATTA     G  KR   GQG DRFYDP+ STA+F +SPGPG Y +   EGAFG+AS+ RSP+FDLMQRRV+G++AA GRSLASL LH+   G  GG G  +  GG    DGLGAPFHAY+++ G G YTPDM APPLPNEARR R  GG
Sbjct:    1 MGCGARKCMTPGKDHPQLPHAKRRDGAGPGPGAYATGDSAVMGHHGGTFAAADNRRAATAALEMVVGRLKTLEWRIEFIRRGEREPEKLRPGQSLVVRTQSGQELMRMEEKASRLRSEIKRLGKLAASEASTRDPLPGASIGRGGRAGG---------NERRPATTAADCSTGRDKRGPAGQGKDRFYDPISSTATFLESPGPGAYSLTSGEGAFGRASISRSPAFDLMQRRVIGDQAAAGRSLASLHLHSAENG--GGSGSGNSRGGR---DGLGAPFHAYLSETGTGHYTPDMSAPPLPNEARRWRRGGG 298
The following BLAST results are available for this feature:
BLAST of mRNA_L-elsbetiae_contig16.4132.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLM3_ECTSI2.300e-11964.74Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..125
IPR010736Sperm-tail PG-rich repeatPFAMPF07004SHIPPO-rptcoord: 198..222
e-value: 0.033
score: 15.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-elsbetiae_contig16contigL-elsbetiae_contig16:1542..5268 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Laminarionema elsbetiae ELsaHSoW152021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_L-elsbetiae_contig16.4132.1mRNA_L-elsbetiae_contig16.4132.1Laminarionema elsbetiae ELsaHSoW15mRNAL-elsbetiae_contig16 1542..5268 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_L-elsbetiae_contig16.4132.1 ID=prot_L-elsbetiae_contig16.4132.1|Name=mRNA_L-elsbetiae_contig16.4132.1|organism=Laminarionema elsbetiae ELsaHSoW15|type=polypeptide|length=311bp
MGFAARKCMTPGEGHPQLAHAKRHDGGGPGPGTYATGDSAVMGHRGGTFA
AQDERRRAAAALEMTVCRLKTLEWRIEFIRRGLREPEGLRPGQALLVKVQ
SGRELERIEAKASRLRSEVERLVSLATAADAKRDPLPGASLGGDANGCRG
GGRGRGPGRRPATTAGVGGAGSGKRQACGQGSDRFYDPVPSTASFRDSPG
PGTYDVEGAFGKASLRRSPSFDLMQRRVVGERAAPGRSLASLRLHATTAG
DPGGGGEDDGFGGTKRGDGLGAPFHAYMADAGPGCYTPDMCAPPLPNEAR
RGRGRGGAHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010736SHIPPO-rpt